Monterey Bay Aquarium Research Institute

Shannon B. Johnson
Research Technician
Monterey Bay Aquarium Research Institute
7700 Sandholdt Road
Moss Landing, CA 95039
Phone: (831) 775-1772
Fax: (831) 775-1620
email: sjohnson

My role at MBARI:
I joined MBARI in February, 2003 as a research technician in the Molecular Ecology lab for Bob Vrijenhoek.  A few projects I am working on are: population genetics and phylogenetics of Lepetodrilid limpets from hydrothermal vents worldwide, population genetics of the bone-eating worms, Osedax, along the Pacific coast, NGS analyses of shallow water phytoplankton and zooplankton, and the evolution of the hydrothermal vent snails, Alviniconcha. I am especially interested in applying statistics to better understand complex datasets.  MBARI is an amazing place to work! They actually pay me to work here and I get to learn new things every.

Educational Background:
BS in Biology, UCLA (Bruins RULE!) - 1999
MS in Marine Science, Moss Landing Marine Laboratories, 2003

Recent Papers:
  • Johnson, S.B., Warén, A., Tunnicliffe, V., VanDover, C., Schultz, T., Wheat, G., Vrijenhoek, R.C. 2015. Molecular taxonomy and naming of five cryptic species of Alviniconcha snails (Gastropoda: Abyssochrysidae) from hydrothermal vents. Systematics and Biodiversity. In Press.
  • Higgs, N.D., Glover, A.G., Dahlgren, T.G., Smith, C.R., Fujiwara, Y., Pradillon, F., Johnson, S.B., Vrijenhoek, R.C., and Little, C.T.S. 2014. The morphological diversity of Osedax worm borings (Annelida: Siboglinidae) J. Mar. Biol. Assoc. U. K. In Press.
  • Arellano, S.M, Van Gaest, A.L., Johnson, S.B., Vrijenhoek, R.C., and Young, C.M. 2014. Larvae from deep-sea methane seeps disperse in surface waters. Proc. B. 281: 20133276.
  • Johnson, S.B., Won, Y.J., Harvey, J.B.J., Vrijenhoek, R.C., 2013. A hybrid zone between Bathymodiolus mussel lineages from eastern Pacific hydrothermal vents. BMC Evol. Biol. 13: 21 pages.
  • Lundsten, L., Johnson, S.B., Cailliet, G.M., DeVogelaere, A.P., and Clague, D.A. 2012. Morphological, molecular, and in situ behavioral observations of the rare deep-sea anglerfish Chaunacops coloratus (Garman, 1899), order Lophiiformes, in the eastern North Pacific. Deep-Sea Res. I. 68: 46-53.
  • Coykendall, D.K., Johnson, S.B., Karl, S.A., Lutz, R.A., Vrijenhoek, R.C., 2011. Genetic diversity and demographic instability in Riftia pachyptila tubeworms from eastern Pacific hydrothermal vents. BMC Evol. Biol. 11, 96: 11 pages.
  • Rouse, G.W., Goffredi, S.K., Johnson, S.B., Vrijenhoek, R.C., 2011. Not whale-fall specialists, Osedax worms also consume fishbones. Biology Letters 7 (5): 736-739.
  • Johnson, S.B., A. Warén, R.W. Lee, Y. Kano, A. Kaim, A. Davis, E.E. Strong, and R.C. Vrijenhoek. 2010. Rubyspira, new genus and two new species of bone-eating deep-sea snails with ancient habits. Bio. Bull. 219: 166-177.
  • Lundsten L., K.L. Schlining, K. Frasier, S.B. Johnson, L.A. Kuhnz, J.B.J. Harvey, G. Clague, and R.C Vrijenhoek. 2010. Time-series analysis of six whale-fall communities in Monterey Canyon, California, USA. Deep-Sea Res. I. 57: 1573-1584.
  • Ryan, J.P., S.B. Johnson, A. Sherman, K. Rajan, F. Py, H. Thomas, J.B.J. Harvey, L. Bird, J.D. Paduan, and R.C. Vrijenhoek. 2010. Mobile autonomous process sampling within coastal ocean observing systems. Limnol. Oceanogr. Methods. 8: 394-402.
  • Hilario, A. S.B. Johnson, M.R. Cunha, and R.C. Vrijenhoek. 2010. High diversity of frenulates (Polychaeta:Siboglinidae) in the Gulf of Cadiz mud volcanoes: A DNA taxonomy analysis. Deep-Sea Res. I. 57: 143-150.
  • Rouse, G.W., N.G. Wilson, S.K. Goffredi, S.B. Johnson, T. Smart, C. Widmer, C.M. Young, and R.C. Vrijenhoek. 2009. Spawning and development in Osedax boneworms (Siboglinidae, Annelida). Mar. Biol. 156: 395-405.
  • Vrijenhoek, R.C., S.B. Johnson, and G.W. Rouse. 2008. Bone-eating Osedax females and their ‘harems’ of dwarf males are recruited from a common larval pool. Molec. Ecol. 17: 4535-4544.
  • Johnson, S.B., A. Warén, and R.C. Vrijenhoek. 2008. DNA barcoding of Lepetodrilus limpets reveals cryptic species. J. Shellfish Res. 27: 43-51.
  • Génio, L., S.B. Johnson, R. C. Vrijenhoek, M.R. Cunha, P.A. Tyler, S. Kiel, and C.T.S. Little. 2008. New records of "Bathymodiolus" mauritanicus (Cosel 2002) from the Gulf of Cadiz (NE Atlantic) mud volcanos. J. Shellfish Res. 27: 53-61.
  • Rouse, G.W., K. Worsaae, S.B. Johnson, W.J. Jones, and R.C. Vrijenhoek. 2008. Acquisition of dwarf male 'harems' by recently settled females of Osedax roseus n. sp. (Siboglinidae; Annelida). Biol. Bull. 214: 67-82.
  • Jones, W.J., S.B. Johnson, G.W. Rouse, and R.C. Vrijenhoek. 2008. Marine Worms (genus Osedax) colonize cow bones. Proc. Royal Soc.  275: 387-391.
  • Foster, M.S., L.M. McConnico, L. Lundsten, T. Wadsworth, T. Kimball, L.B. Brooks, M. Medina-Lopez, R. Riosmena-Rodriguez, G. Hernandez-Carmona, R.M. Vasquez-Elizondo, S. Johnson, D.L. Steller. 2007. Diversity and natural history of a Lithamnion muelleri-Sargassum horridum community in the Gulf of California. Ciencias Marinas, 33: 367-384.
  • Braby, C.E., G.W. Rouse, S.B. Johnson, W.J. Jones, R.C. Vrijenhoek. 2007. Bathymetric and temporal variation among Osedax boneworms and associated megafauna on whale-falls in Monterey Bay, California. Deep-Sea Res. I., 54: 1773-1791.
  • Goffredi, S.K., S.B. Johnson, and R.C. Vrijenhoek. 2007. Genetic diversity and potential function of microbial symbionts associated with newly discovered species of Osedax polychaete worms. AEM,  73: 2314-2323.
  • Johnson, S.B., C.R. Young, W.J. Jones, A. Warén, and R.C. Vrijenhoek. 2006.  Migration, isolation and speciation of hydrothermal vent limpets (Gastropoda; Lepetodrilidae) across the Blanco Transform Fault. Bio. Bull., 210: 140-157.
  • Johnson, S.B. and J.G. Geller. 2006. Larval settlement can explain the adult distribution of Mytilus californianus Conrad but not of M. galloprovincialis Lamarck or M. trossulus Gould in Moss Landing, central California: Evidence from genetic identification of spat. JEMBE, 328: 136-145.