Year Published

Displaying 2401-2500 of 2,819 Publications


Schlining, B. 1999. Seasonal intrusions of equatorial waters in Monterey Bay and their effects on mesopelagic animal distributions: 68.

Schlining, K.L. 1999. The spot prawn (Pandalus platyceros Brandt 1851) resource in Carmel Submarine Canyon, California: Aspects of fisheries and habitat associations.

Scholin, C., R. Marin III, P.E. Miller, G.J. Doucette, C.L. Powell, J. Howard, P. Haydock, and J. Ray. 1999. Application of DNA probes and a receptor binding assay for detection of Pseudo-nitzschia (Bacillariophyceae) species and domoic acid activity in cultured and natural samples. Journal of Phycology, 35: 1356–1367.

Scholin, C.A., R. Marin III, P.E. Miller, G.J. Doucette, C.L. Powell, P. Haydock, J. Howard, and J. Ray. 1999. DNA probes and a receptor-binding assay for detection of Pseudo-nitzschia (Bacillariophyceae) species and domoic acid activity in cultured and natural samples. Journal of Phycology, 35: 1356–1367.

Shank, T.M., M.B. Black, K.M. Halanych, R.A. Lutz, and R.C. Vrijenhoek. 1999. Miocene radiation of deep-sea hydrothermal vent shrimp (Caridea: Bresiliidae): Evidence from mitochondrial cytochrome oxidae subunit I. Molecular Phylogenetics and evolution, 12: 244–254.

Sims, K.W.W., D.J. DePaolo, M.T. Murrell, W.S. Baldridge, S. Goldstein, D. Clague, and M. Jull. 1999. Porosity of the melting zone and variations in the solid mantle upwelling rate beneath Hawaii: Inferences from 238U-230Th-226Ra and 235U-231Pa disequilibria. Geochimica et Cosmochimica Acta, 63: 4119–4138.

Stakes, D., C.A. Rigsby, and P.C. Baucom. 1999. Igneous and sedimentary rocks form Monterey Canyon, California and implications for regional tectonics. Pacific section AAPG, volume and guidebook: 75–92.

Stakes, D., D. Orange, J. Paduan, K. Salamy, and N. Maher. 1999. Origin of authigenic cold-seep carbonates from Monterey Bay. Marine Geology, 159: 93–109.

Steward, G.F., and F. Azam. 1999. Bromodeoxyuridine as an alternative to super(3)H-thymidine for measuring bacterial productivity in aquatic samples. Aquatic Microbial Ecology, 19: 57–66.

Tamburri, M.N., and J.P. Barry. 1999. Adaptations for scavenging by three diverse bathyla species, Eptatretus stouti, Neptunea amianta and Orchomene obtusus. Deep-Sea Research I, 46: 2079–2093.

Tamburri, M.N., and J.P. Barry. 1999. Corrigendum to "Adaptations for scavenging by three diverse bathyla species Eptatretus stouti, Neptunea amianta and Orchomene obtusus" [Deep-Sea Research 46 (1999) 2079-2093]. Deep Sea Research Part I: Oceanographic Research Papers, 47: 755.

Tivey, M.K., D. Stakes, T. L. Cook, M.D. Hannington, and S. Petersen. 1999. Petrology and geochemistry of massive sulfide samples from the Endeavour segment of the Juan de Fuca Ridge. Journal of Geophyiscal Research, 104: 22859–22883.

Tivey, M.K., D.S. Stakes, T.L. Cook, M.D. Hannington, and S. Petersen. 1999. A model for growth of steep-sided vent structures on the Endeavour Segment of the Juan de Fuca Ridge: Results of a petrologic and geochemical study. Journal of Geophysical Research, 104: 22859–22883.

Vrijenhoek, R.C. 1999. Parthenogenesis and natural clones. Encyclopedia of reproduction, 3: 695–702.

Walsh, J.J., D.A. Dieterle, F.E. Muller-Karger, R. Bohrer, W.P. Bissett, R.J. Varela, R. Aparicio, R. Diaz, R. Thunell, G.T. Taylor, M.I. Scranton, K.A. Fanning, and E.T. Peltzer. 1999. Simulation of carbon-nitrogen cycling during spring upwelling in the Cariaco Basin. Journal of Geophyiscal Research, 104: 7807–7825.

Wilkin, D.J., K.R. Debure, and Z.W. Roberts. 1999. Query by sketch in DARWIN - digital analysis to recognize whale images on a network. Conference of the Storage and Retrieval for Image and Video Databases, 3656: 41–48.

Yang, H.J., F.A. Frey, D.A. Clague, and M.O. Garcia. 1999. Mineral chemistry of submarine lavas from the Hilo Ridge, Hawaii: Implications for magmatic processes within Hawaiian rift zones. Contributions to Mineralogy and Petrology,135: 355–372.


Alldredge, A.L., U. Passow, and S.H.D. Haddock. 1998. The characteristics and transparent exopolymer particle (TEP) content of marine snow formed from thecate dinoflagellates. Journal of Plankton Research, 20(3): 393–406. doi:10.1093/plankt/20.3.393

Barry, J.P., and R.E. Kochevar. 1998. A tale of two clams: Differing chemosynthetic life styles among vesicomyids in Monterey Bay cold seeps. Cahiers de Biologie Marine, 39: 329–331.

Berger, W.H., and C.B. Lange. 1998. Silica depletion in the thermocline of the glacial North Pacific; corollaries and implications [Monograph]. Topical studies in oceanography; studies of the California current system, Part 1.

Braby, C.E. 1998. Olfactory organs of mesopelagic cephalopods: comparative morphology and ecological function: 79.

Brewer, P.G., F.M. Orr Jr., G. Friederich, K.A. Kvenvolden, and D.L. Orange. 1998. Gas hydrate formation in the deep sea: In situ experiments with controlled release of methane, natural gas, and carbon dioxide. Energy & Fuels, 12: 183–188.

Browne, K.A., M.N. Tamburri, and R.K. Zimmer-Faust. 1998. Modeling quantitative structure-activity relationships between animal behavior and environmental signal molecules. Journal of Experimental Biology, 201: 245–258.

Buck, K.R., and J.P. Barry. 1998. Monterey Bay cold seep infauna: quantitative comparison of bacterial mat meiofauna with non-seep control sites. Cahiers de Biologie Marine, 39: 333–335.

Buck, K.R., and W.N. Bentham. 1998. A novel symbiosis between a cyanobacterium, Synechococcus sp., an aplastidic protist, Solenicola setigera, and a diatom, Leptocylindrus mediterraneus, in the open ocean. Marine Biology, 132: 349–355.

Buck, K.R., T.G. Nielsen, B.W. Hansen, D. Gastrup-Hansen, and H.A. Thomsen. 1998. Infiltration phyto- and protozooplankton assemblages in the annual sea ice of Disko Island, West Greenland, spring 1996. Polar Biologym, 20: 377–381.

Burgess, W.C., P.L. Tyack, B.J. Le Boeuf, and D.P. Costa. 1998. A programmable acoustic recording tag and first results from free-ranging northern elephant seals. Deep-Sea Research II, 45: 1327–1351.

Chavez, F., and C. Collins. 1998. Studies of the California Current System. Deep Sea Research Part II: Topical Studies in Oceanography, 45.

Chavez, F.P., P.G. Strutton, and M.J. McPhaden. 1998. Biological-physical coupling in the central equatorial Pacific during the onset of the 1997-98 El Niñoo. Geophysical Research Letters, 25: 3543–3546.

Clague, D.A. 1998. Geology of the Hawaiian Islands. Atlas of Hawaii: 37–46.

Coale, K.H., K.S. Johnson, S.E. Fitzwater, S.P.G. Blain, T. Stanton, and T.L. Coley. 1998. IronEx-I, an in situ iron-enrichment experiment: Experimental design, implementation and results. Deep-Sea Research II, 45: 919–945.

Cohen, W.D., and M.N. Tamburri. 1998. Distinctive cytoskeletal organization in erythrocytes of the cold-seep vesicomyid clam, Calyptogena kilmeri. Biological Bulletin, 194: 7–13.

Cohen, W.D., and M.N. Tamburri. 1998. Peripheral centrosomes in erythrocytes of the vesicomyid clam, Calyptogena kilmeri: A molluscan erythrocyte cytoskeletal motif. Biological Bulletin, 194: 7–13.

Colbert, D., K.S. Johnson, and K.H. Coale. 1998. Determination of cadmium in seawater using automated on-line preconcentration and direct injection graphite furnace atomic absorption spectrometry. Analytica Chimica Acta, 377: 255–262.

Dawe, T.C., D.S. Stakes, P.R. McGill, J.P. Barry, and S. Etchemendy. 1998. Subsea instrument deployments: methodology and techniques using a work class Remotely Operated Vehicle (ROV). Oceans '98, 3: 1589–1593.

DeLong, E.F. 1998. Everything in moderation: Archaea as 'non-estremophiles'. Current Opinion in Genetics & Development, 8: 649–654.

DeLong, E.F. 1998. Molecular phylogenetics: New perspective on the ecology, evolution and biodiversity of marine organisms. Molecular approaches to the study of the ocean: 1–27.

DeLong, E.F., L.L. King, R. Massana, H. Cittone, A.E. Murray, C. Schleper, and S.G. Wakeham. 1998. Dibiphytanyl ether lipids in nonthermophilic crenarchaeotes. Applied and Environmental Microbiology, 64: 1133–1138.

Dickey, T., D. Frye, H.W. Jannasch, E. Boyle, D. Manov, D. Sigurdson, J. McNeil, M. Stramska, A.F. Michaels, N. Nelson, D.A. Siegel, G. Chang, J. Wu, and A.H. Knap. 1998. Initial results from the Bermuda Testbed Mooring program. Deep-Sea Research I, 45: 771–794.

Dickey, T., D. Frye, J. McNeil, D. Manov, N. Nelson, D. Sigurdson, H.W. Jannasch, D. Siegel, T. Michaels, and R. Johnson. 1998. Upper-ocean temperature response to Hurricane Felix as measured by the Bermuda Testbed Mooring. Monthly Weather Review, 126: 1195–1201.<1195_Uotrth>2.0.Co;2

Goffredi, S.K., J.J. Childress, F.H. Lallier, and N.T. Desaulniers. 1998. How to be the perfect host: CO2 and HS- accumulation and H+ elimination in the hydrothermal vent tube-worm Riftia pachyptila. Cahiers de Biologie Marine, 39: 297–300.

Gordon, R.M., K.S. Johnson, and K.H. Coale. 1998. The behaviour of iron and other trace elements during the IronEx-I and PlumEx experiments in the Equatorial Pacific. Deep-Sea Research II, 45: 995–1041.

Haddock, S.H.D., D.J. Neilson, E.A. Widder, and J.F. Case. 1998. Feasibility of using in situ measurements of bioluminescence spectra to determine the vertical distribution of plankton In Pelagic Biogeography ICoPB II: Proceedings of the second international conference: Final report of SCOR/IOC working group 93 “Pelagic Biogeography,” Noordwijkerhout, The Netherlands, July 1995, 137–142. Paris, France: UNESCO.

Hopcroft, R.R., and J.C. Roff. 1998. Production of tropical larvaceans in Kingston Harbour, Jamaica: Are we ignoring an important secondary producer?. Journal of Plankton Research, 20: 557–569.

Hopcroft, R.R., and J.C. Roff. 1998. Zooplankton growth rates: The influence of female size and resources on egg production of tropical marine copepods. Marine Biology, 132: 79–86.

Hopcroft, R.R., and J.C. Roff. 1998. Zooplankton growth rates: The influence of size in nauplii of tropical marine copepods. Marine Biology, 132: 87–96.

Hopcroft, R.R., J.C. Roff, and D. Lombard. 1998. Production of tropical copepods in Kingston Harbour, Jamaica: The importance of small species. Marine Biology, 130: 593–604.

Hopcroft, R.R., J.C. Roff, and H.A. Bouman. 1998. Zooplankton growth rates: the larvaceans Appendicularia, Fritillaria and Oikopleura in tropical waters. Journal of Plankton Research, 20: 539–555.

Hopcroft, R.R., J.C. Roff, M.K. Webber, and J.D.S. Witt. 1998. Zooplankton growth rates: The influence of size and resources in tropical marine copepodites. Marine Biology, 132: 67–77.

Hovanec, T.A., L.T. Taylor, A. Blakis, and E.F. DeLong. 1998. Nitrospira-like bacteria associated with nitrite oxidation in freshwater aquaria. Applied and Environmental Microbiology, 64: 258–264.

Jannasch, H.W., C.M. Sakamoto, G. Wheat, T. Dickey, and K. Johnson. 1998. Osmotically pumped chemical analyzers and samplers for long-term oceanographic monitoring. International Workshop in Marine Analytical Chemistry for Monitoring and Oceanographic Research.

Jordahl, K.A., M.K. McNutt, and H. Zorn. 1998. Pacific-Farallon relative motion 42-59 Ma determined from magnetic and tectonic data from the southern Austral Islands.

Kirkwood, W.J. 1998. Tiburon: Science and technical results from MBARI's new ROV integrated to a SWATH platform. Ocean's '98, 3: 1578–1583.

Kohn, M.J., L.R. Riciputi, D. Stakes, and D.L. Orange. 1998. Sulfur isotope variability in biogenic pyrite: Reflections of heterogeneous bacterial colonization?. American Minerologist, 83: 1454–1468.

Lauerman, L.M.L. 1998. Diet and feeding behavior of the deep-water sea star Rathbunaster californicus (Fisher) in the Monterey Submarine Canyon. Bulletin of Marine Science, 63(3): 523–530.

Massana, R., L.T. Taylor, A.E. Murray, K.Y. Wu, W.H. Jeffrey, and E.F. DeLong. 1998. Vertical distribution and temporal variation of marine planktonic archaea in the Gerlache Strait, Antarctica, during early spring. Limnology and Oceanography, 43: 607–617.

McGillicuddy Jr., D.J., A.R. Robinson, D.A. Siegel, H.W. Jannasch, R. Johnson, T.D. Dickey, J. McNeil, A.F. Michaels, and A.H. Knap. 1998. Influence of mesoscale eddies on new production in the Sargasso Sea. Nature, 394: 263–266.

Miller, P.E., and C.A. Scholin. 1998. Identification and enumeration of cultured and wild Pseudo-Nitzschia (Bacillariophyceae) using species-specific LSU rRNA-targeted fluorescent probes and filter-based whole cell hybridization. Journal of Phycology, 34: 371–382.

Morvillez, T., C.S. Chiu, and C.A. Collins. 1998. Monitoring Temperature Variability Along the California Coast Using Acoustic Tomography. The Journal of the Acoustical Society of America, 103: 50.

Murray, A.E., C.M. Preston, R. Massana, L.T. Taylor, A. Blakis, K. Wu, and E.F. DeLong. 1998. Seasonal and spatial variability of bacterial and archaeal assemblages in the coastal waters near Anvers Island, Antarctica. Applied and Environmental Microbiology, 64: 2585–2595.

Pilskaln, C.H., C. Lehmann, J.B. Paduan, and M.W. Silver. 1998. Spatial and temporal dynamics in marine aggregate abundance, sinking rate and flux: Monterey Bay, central California. Deep-Sea Research II, 45: 1803–1837.

Rath, J., K.Y. Wu, G.J. Herndl, and E.F. DeLong. 1998. High phylogenetic diversity in a marine-snow-associated bacterial assemblage. Aquatic Microbial Ecology, 14: 261–269.

Rau, G.H., C. Low, J.T. Pennington, K.R. Buck, and F.P. Chavez. 1998. Suspended particulate nitrogen d15N versus nitrate utilization: observations in Monterey Bay, CA.. Deep-Sea Research II, 45: 1603–1616.

Rhodes, L.L., C. Scholin, I. Garthwaite, A. Haywood, and A. Thomas. 1998. Domoic acid-producing Pseudo-nitzschia species educed by whole cell DNA probebased and immunochemical assays. Harmful algae, 274–277.

Robison, B.H., K.R. Reisenbichler, R.E. Sherlock, J.M.B. Silguero, and F.P. Chavez. 1998. Seasonal abundance of the siphonophore, Nanomia bijuga, in Monterey Bay. Deep Sea Research Part II: Topical Studies in Oceanography, 45: 1741–1751.

Romanowicz, B., D. Stakes, J.P. Montagner, P. Tarits, R. Uhrhammer, M. Begnaud, E. Stutzmann, M. Pasyanos, J.F. Karczewski, S. Etchemendy, and D. Neuhauser. 1998. MOISE; a pilot experiment towards long term sea-floor geophysical observatories.

Sakamoto, C.M., F.J. Millero, W. Yao, G.E. Friederich, and F.P. Chavez. 1998. Surface seawater distributions of inorganic carbon and nutrients around the Galapagos Islands: Results from the PlumEx experiment using automated chemical mapping. Deep-Sea Research II, 45: 1055–1071.

Schleper, C., C.M. Preston, R.A. Feldman, K.Y. Wu, E.F. Delong, and R.V. Swanson. 1998. Genomic analysis reveals chromosomal variation in natural populations of the uncultured psychrophilic archaeon Cenarchaeum symbiosum. Journal of Bacteriology, 180: 5003–5009.

Schlining, K.L., and J.D. Spratt. 1998. Assessment of the Carmel Bay spot prawn, Pandalus platyceros, resource and trap fishery adjacent to an ecological reserve in central California. Fourth International Crustacean Congress: 751–762.

Scholin, C., G. Massion, E. Mellinger, M. Brown, D.K. Wright, and D. Cline. 1998. The development and application of molecular probes and novel instrumentation for detection of harmful algae. Ocean community conference '98, MTS, 1: 367–370.

Scholin, C.A. 1998. Development of nucleic acid probe-based diagnostics for identifying and enumerating harmful algal bloom species. The Physiological Ecology of Harmful Algal Blooms.

Scholin, C.A. 1998. Morphological, genetic, and biogeographic relationships of the toxic dinoflagellates Alexandrium tamarense, A. catenella, and A. fundyense.

Schuur, C.L., M.F. Coffin, C. Frohlich, C.G. Massell, G.D. Karner, D. Ramsay, and D. Caress. 1998. Sedimentary regimes at the Macquarie Ridge Complex: Interaction of Southern Ocean circulation and plate boundary bathymetry. Paleoceanography, 13: 646–670.

Service, S.K., J.A. Rice, and F.P. Chavez. 1998. Relationship between physical and biological variables during the upwelling period in Monterey Bay, CA.. Deep-Sea Research II, 45: 1669–1685.

Sichoix, L., A. Bonneville, and M.K. McNutt. 1998. The seafloor swells and Superswell in French Polynesia. Journal of Geophyiscal Research, 103: 27123–27133.

Stakes, D.S., B. Romanowicz, J.P. Montagner, P. Tarits, J.F. Karczewski, S. Etchemendy, T.C. Dawe, D. Neuhauser, P.R. McGill, J.C. Koening, J. Savary, M. Begnaud, and M. Pasyanos. 1998. Seismic experiment paves way for long-term seafloor observatories. EOS, Transactions, 79: 308–309.

Stakes, D.S., J. McClain, T. VanZandt, P.R. McGill, and M. Begnaud. 1998. Corehole seismometer development for low-noise seismic data in a long-term seafloor observatory. Geophysical Research Letters, 25: 2745–2748.

Suess, E., G. Bohrmann, R. von Huene, P. Linke, K. Wallmann, S. Lammers, H. Sahling, G. Winckler, R.A. Lutz, and D. Orange. 1998. Fluid venting in the eastern Aleutian subduction zone. Journal of Geophysical Research, 103: 2597–2614.

Thomsen, H.A., and K.R. Buck. 1998. Nanoflagellates of east Pacific coastal waters: morphology, taxonomy, and biogeography of weakly calcified coccolithophorids (Prymnesiophyceae). Cryptogamie. Algologie, 19: 29–48.

Thomsen, H.A., and K.R. Buck. 1998. Nanoflagellates of the central California waters: taxonomy, biogeography and abundance of primitive, green flagellates (Pedinophyceae, Prasinophyceae). Deep-Sea Research II, 45: 1687–1707.

Thunell, R.C. 1998. Particle fluxes in a coastal upwelling zone; sediment trap results from Santa Barbara Basin, California [Monograph]. Topical studies in oceanography: studies of the California current system, Part 1.

Vergin, K.L., E. Urbach, J.L. Stein, E.F. DeLong, B.D. Lanoil, and S.J. Giovannoni. 1998. Screening of a fosmid library of marine environmental genomic DNA fragments reveals four clones related to members of the order Planctomycetales. Applied and Environmental Microbiology, 64: 3075–3078.

Wagner, T.P., D.A. Clague, E.H. Hauri, and T.L. Grove. 1998. Trace element abundances of high-MgO glasses from Kilauea, Mauna Loa and Haleakala volcanoes, Hawaii. Contributions to Mineralogy and Petrology, 131: 13–21.

Wagner, T.P., T.L. Grove, and D.A. Clague. 1998. Melt/harzburgite reaction in the petrogenesis of tholeiitic magma from Kilauea volcano, Hawaii. Contrib Mineral Petro, 131: 1–12.

Weisler, M.I., and D. Clague. 1998. Characterization of archaeological volcanic glass from Oceania: The utility of three techniques. Archaeological obsidian studies: Methods and theory: 103–123.

White, G.B., A. Pfahnl, S.H.D. Haddock, S. Lamers, R.M. Greenberg, and P.A. Anderson. 1998. Structure of a putative sodium channel from the sea anemone Aiptasia pallida. Invert Neurosci, 3: 317–326.

Zamzow, H., K.H. Coale, K.S. Johnson, and C.M. Sakamoto. 1998. Determination of copper complexation in sewater using flow injection analysis with chemiluminescence detection. Analytica Chimica Acta, 377: 133–144.


Barry, J.P., R.E. Kochevar, and C.H. Baxter. 1997. The influence of pore-water chemistry and physiology on the distribution of vesicomyid clams at cold seeps in Monterey Bay: Implications for patterns of chemosynthetic community organization. Limnology and Oceanography, 42: 318–328.

Barry, J.P., R.E. Kochevar, C.H. Baxter, and C. Harrold. 1997. Calyptogena packardana, a new species of vesicomyid bivalve from cold seeps in Monterey Bay, California. Veliger, 40: 341–349.

Barry, J.P., R.E. Kochevar, J. Hashimoto, Y. Fujiwara, K. Fujikura, and H.G. Greene. 1997. Studies of the physiology of chemosynthetic fauna at cold seeps in Sagami Bay, Japan. JAMSTEC Journal of Deep-Sea Research, 13: 417–423.

Brewer, P.G. 1997. Ocean chemistry of the fossil fuel CO2 signal: The haline signal of "business as usual". Geophysical Research Letters, 24: 1367–1369.