We collaborate with various research teams both internal to MBARI and external, integrating data from different disciplines (from physics to ecosystems), different instruments (from AUVs to satellites), and different regions (from Monterey Bay to the world) to study ecosystem processes and physical/biological interactions in the coastal and open oceans. We analyze data using statistical and machine learning techniques to investigate relationships between physics and biology in the ocean, and test them using simple mathematical models.

We are particularly interested in addressing which processes drive the spatio-temporal variability of biological communities throughout the water column, across the California Current system, and at smaller scales in Monterey Bay. These processes can be physical (such as coastal upwelling, advection by oceanic currents, large-scale climate variability) or biological (such as phytoplankton/zooplankton interactions).

Relationships are challenging to decipher because they are not always direct. For instance, biological populations do not only respond to today’s conditions but also depend on the history of events that occurred during their lifetime. Similarly, because plankton are displaced by currents, what we observe in one location may be the result of past conditions tens of kilometers away. We use simple models to disentangle these effects and uncover which processes drive biological communities, and the qualitative nature and quantitative functionality of that relationship.

Publications

Stukel, M.R., A.E. Allen, K.A. Barbeau, P. Chabert, S. Dovel, S. Gangrade, S.A. Kranz, R.H. Lampe, M.R. Landry, P. Marrec, M. Messié, A.J. Miller, G. Wilkinson, and M.D. Ohman. 2025. Disturbance ecology in a pelagic upwelling biome: Lagrangian frameworks for studying succession. BioScience: biaf144. https://doi.org/10.1093/biosci/biaf144

Messié, M., C. L. Huffard, M. R. Stukel, and H. A. Ruhl. 2025. Spatial and temporal interplay between oceanic circulation and biological production in shaping carbon export off the California coast. Geophysical Research Letters, 52(7): e2024GL113707. https://doi.org/10.1029/2024GL113707    

Oms, L., M. Messié, J.-C. Poggiale, G. Grégori, and A. Doglioli. 2024. Fine-scale phytoplankton community transitions in the oligotrophic ocean: A Mediterranean Sea case study. Journal of Marine Systems, 246(104021). doi:10.1016/j.jmarsys.2024.104021

Tzortzis, R., A.M. Doglioli, M. Messié, S. Barrillon, A.A. Petrenko, L. Izard, Y. Zhao, F. d’Ovidio, F. Dumas, and G. Gregori. 2023. The contrasted phytoplankton dynamics across a frontal system in the southwestern Mediterranean Sea. Biogeosciences, 20(16): 3491-3508. doi:10.5194/bg-20-3491-2023

Bergamasco, A., E. Camatti, M. Messié, and Y. Deng. 2023. Editorial: Ocean-biota system: Integrated approach to climate change impacts on plankton communities in coastal and pelagic environments. Frontiers in Marine Science, 10. https://doi.org/10.3389/fmars.2023.1296237

Technologies