EARTH 2018 – Day 2

Objective: Biological data
0800–0830 Breakfast
0830–0900 Morning overview George Matsumoto (MBARI)
0900–0920 Presentation—Marine Mammal Stranding Network Jim Rice
OSU Marine Mammal Inst
0920–1030 Necropsy and behind the scenes tour of NOAA’s Alaska Fisheries Science Center labs
1030–1100 Dataset Exploration
1100–1200 Lesson Evaluations

The Blue Mud Shrimp Mystery

  • James Johnson
  • Melissa Kilgore

Upwelling Case Study

  • Nancy FitzGerald
  • Dina DiSantis

Elkhorn Slough Case Study

  • Dina DiSantis

Deep-Sea Sort

  • Annie Forman
  • Megan McDonald


  • Tanya Boynay
    • Mini lesson created by a colleague adapted by previous workshop attendant; adapted from an Earth lesson
  • Erik Fowler
1200–1300 Lunch
1300–1400 Science Presentation—Using AIS ship tracking data for fishing vessels and overlays sea bird tracking data to identify potential fisheries bycatch issues Leigh Torres
Rachel Orben
1400–1415 Break
1415–1500 Dataset Exploration—
1500–1600 Science Presentation—MBARI’s Deep Sea video data Megan Bassett
1600–1615 Break
1615–1700 Dataset Exploration—
1700 Daily Evaluation
1800 DinnerOna Restaurant & Lounge, Yachats, OR


Data repository
Data policy
What is happening in Monterey Bay today?
Central and Northern California Ocean Observing System
Chemical data
Ocean float data
Slough data
Mooring ISUS measurements
Southern Ocean Data
Mooring data
M1 Mooring Summary Data
M1 Asimet
M1 Download Info
M1 EMeter
M1 Fluorometer (CeNCOOS)
Molecular and genomics data
ESP Web Portal
Seafloor mapping
Upper ocean data
Spatial Temporal Oceanographic Query System (STOQS) Data
Image gallery
Video library
Previous seminars
David Packard Distinguished Lecturers
Research software
Video Annotation and Reference System
System Overview
Annotation Interface
Video Tape User Guide
Video File User Guide
Annotation Glossary
Query Interface
Basic User Guide
Advanced User Guide
Query Glossary
VARS Publications
Oceanographic Decision Support System
MB-System seafloor mapping software
How to Download and Install MB-System
MB-System Documentation
MB-System Announcements
MB-System Announcements (Archive)
MB-System FAQ
MB-System Discussion Lists
MB-System YouTube Tutorials
Matlab scripts: Linear regressions
Introduction to Model I and Model II linear regressions
A brief history of Model II regression analysis
Index of downloadable files
Summary of modifications
Regression rules of thumb
Results for Model I and Model II regressions
Graphs of the Model I and Model II regressions
Which regression: Model I or Model II?
Matlab scripts: Oceanographic calculations
Matlab scripts: Sound velocity
Visual Basic for Excel: Oceanographic calculations
Educational resources
MBARI Summer Internship Program
2017 Summer Interns Blog
Education and Research: Testing Hypotheses (EARTH)
EARTH workshops
2016—New Brunswick, NJ
2015—Newport, Oregon
2016 Satellite workshop—Pensacola, FL
2016 Satellite workshop—Beaufort, NC
EARTH resources
EARTH lesson plans
Lesson plans—published
Lesson plans—development
Lesson drafts—2015
Lesson drafts—2016 Pensacola
Adopt-A-Float Program
Center for Microbial Oceanography: Research and Education (C-MORE) Science Kits
Sample archive