MBARI Publications

2018

Takeshita, Y., Johnson, K.S., Martz, T.R., Plant, J.N., Sarmiento, J. L., (2018). Assessment of autonomous pH measurements for determining surface seawater partial pressure of CO2 Journal of Geophyiscal Research, 123, 4003-4013. https://doi.org/10.1029/2017JC013387
Takeshita, Y., Cyronak, T., Martz, T.R., Kindeberg, T., Andersson, A., (2018). Coral reef carbonate chemistry variability at different functional scales Frontiers in Marine Science . https://doi.org/10.3389/fmars.2018.00175
Schultz, D.T., Kotlobay, A.A., Ziganshin, R., Bannikov, A., Markina, N.M., Chepurnyh, T.V., Shakhova, E.S., Palkina, K., Haddock, S.H.D., Yampolsky, I.V., Oba, Y., (2018). Luciferase of the Japanese syllid polychaete Odontosyllis umdecimdonta Biochemical and Biophysical Research Communications, 502, 318-323. https://doi.org/10.1016/j.bbrc.2018.05.135
Swart, S., Johnson, K.S., Mazloff, M.R., Meijers, A., Meredith, M.P., Newman, L., Sallée, J.-B., (2018). The Southern Ocean State of the Climate in 2017, 99, S185-S190. http://doi.org/10.1175/2018BAMSStateoftheClimate.1
Jones, M.R., Soule, S.A., Gonnermann, H.M., Le Roux, V., Clague, D.A., (2018). Magma ascent and lava flow emplacement rates during the 2011 Axial Seamount eruption based on CO2 degassing Earth and Planetary Science Letters, 494, 32-41. https://doi.org/10.1016/j.epsl.2018.04.044
Lodes, K., Matsumoto, G.I., Magnusson, J., (2018). Education And Research: Testing Hypotheses (EARTH) Marine Technology Society Journal, 52, .
Munro, C., Siebert, S., Zapata, F., Howison, M., Damian-Serrano, A., Church, S. H., Goetz, F.E., Pugh, P. R., Haddock, S.H.D., Dunn, C. W., (2018). Improved phylogenetic resolution within Siphonophora (Cnidaria) with implications for trait evolution Molecular Phylogenetics and Evolution, 127, 823-833. https://doi.org/10.1016/j.ympev.2018.06.030
Nielsen, K., Stachowicz, J., Carter, H., Boyer, K., Bracken, M., Chan, F., Chavez, F., Hovel, K., Kent, M., Nickols, K., Ruesink, J., Tyburczy, J., Wheeler, S., (2018). Emerging understanding of the potential role of seagrass and kelp as an ocean acidification management tool in California .
Rouse, Greg W., Goffredi, Shana K., Johnson, Shannon B., Vrijenhoek, Robert C., (2018). An inordinate fondness for Osedax (Siboglinidae: Annelida): Fourteen new species of bone worms from California Zootaxa, 4377, 451. http://doi.org/10.11646/zootaxa.4377.4.1
Sanamyan, K.E., Sanamyan, N.P., Kuhnz, L., (2018). A new Culeolus species (Ascidiacea) from the NE Pacific, California Zootaxa, 4420, 270-278. https://doi.org/10.11646/zootaxa.4420.2.8
Fassbender, A.J., Alin, S.R., Feely, R.A., Sutton, A.J., Newton, J.A., Krembs, C., Bos, J., Keyzers, M., Devol, A., Ruef, W., Pelletier, G., (2018). Seasonal carbonate chemistry variability in marine surface waters of the US Pacific Northwest Earth System Sicence Data, 10, 1367-1401. https://doi.org/10.5194/essd-10-1367-2018
Feely, Richard A., Okazaki, Remy R., Cai, Wei-Jun, Bednaršek, Nina, Alin, Simone R., Byrne, Robert H., Fassbender, Andrea, (2018). The combined effects of acidification and hypoxia on pH and aragonite saturation in the coastal waters of the California current ecosystem and the northern Gulf of Mexico Continental Shelf Research, 152, 50-60. https://doi.org/10.1016/j.csr.2017.11.002
Dunlop, K.M., Jarvis, T., Benoit-Bird, K.J., Waluk, C.M., Caress, D.W., Thomas, H., Smith Jr., K.L., (2018). Detection and characterization of deep-sea benthopelagic animals from an autonomous underwater vehicle with a multibeam echosounder: a proof of concept and description of data-processing methods Deep Sea Research 1, 134, 64-69. https://doi.org/10.1016/j.dsr.2018.01.006
Clague, D.A., Caress, D.W., Dreyer, B.M., Lundsten, L., Paduan, J.B., Portner, R.A., Spelz-Madero, R., Bowles, J.A., Castillo, P.R., Guardado-France, R., Le Saout, M., Martin, J.F., Santa Rosa-del Rio, M.A., Zierenber, R.A., (2018). Geology of the Alarcon Rise, Southern Gulf of California Geochemistry Geophysics Geosystems, 19, 807-837. http://doi.org/10.1002/2017GC007348
Dornelas, M., Antao, L.H., Moyes, E., Bates, A.E., Magurran, A.E., Adam, D., Akhmetzhanova, A.A., Appeltans, W., Arcos, J.M., Arnold, H., Ayyappan, N., Badihi, G., Baird, A.H., Barbosa, M., Barreto, T.E., Bassler, C., Bellgrove, A., Belmaker, J., Benedetti-Checchi, L., Bett, B.J., Bjorkman, A.D., Blazewicz, M., Blowes, S.A., Bloch, C.P., Bonebrake, T.C., Boyd, S., Brandford, M., Brooks, A.J., Brown, J.H., Bruelheide, H., Budy, P., Carvalho, F., Castaneda-Moya, E., Chen, C.A., Chamblee, J.F., Chase, T.J., Collier, L.S., Collinge, S.K., Condit, R., Cooper, E.J., Cornelissen, J.H.C., Cotano, U., Crow, S.K., Damasceno, G., Davies, C.H., Davis, R.A., Day, F.P., Degraer, S., Doherty, T.S., Dunn, T.E., Durigan, G., Duffy, J.E., Edelist, D., Edgar, G.J., Elahi, R., Elmendorf, S.C., Enemar, A., Ernest, S.K.M., Escribano, R., Estiarte, M., Evans, B.S., Fan, T.Y., Farah, F.T., Fernandes, L.L., Farneda, F.Z., Fidelis, A., Fitt, R., Fozaa, A.M., Franco, G.A.D.C., Frank, G.E., Fraser, W.R., Garcia, H., Gatti, R.C., Givan, O., Gorgone-Barbosa, E., Gould, W.A., Gries, C., Grossman, G.D., Gutierrez, J.R., Hale, S., Harmon, M.E., Harte, J., Haskins, G., Henshaw, D.L., Hermanutz, L., Hidalgo, P., Higuchi, P., Hoey, A., Hoey, G.V., Hofgaard, A., Holeck, K., Hollister, R.D., Holmes, R., Hoogenboom, M., Hsieh, C., Hubbell, S.P., Huettmann, F., Huffard, C.L., Hurlbert, A.H., Ivanauskas, N.M., Janik, D., Jandt, U., Jazdzewska, A., Johannessen, T., Johnstone, J., Jones, J., Jones, F.A.M., Kang, J., Kartawijaya, T., Keeley, E.C., Kelt, D.A., Kinnear, R., Klanderud, K., Knutsen, H., Koenig, C.C., Kortz, A.R., Kral, K., Kuhnz, L.A., Kuo, C.Y., Kushner, D.J., Laguionie-Marchias, C., Lancaster, L.T., Lee, C.M., Lefcheck, J.S., Levesque, E., Lightfoot, D., Lloret, F., Lloyd, J.D., Lopez-Baucells, A., Louzano, M., Madin, J.S., Magnusson, B., Malamud, S., Matthews, I., McFarland, K.P., McGill, B., MvKnight, D., McLarney, W.O., Meador, J., Meserve, P.L., Metcalfe, D.J., Meyer, C.F.J., Michelsen, A., Milchakova, N., Moens, T., Moland, E., Moore, J., Moreira, C.M., Miller, J., Murphy, G., Myers-Smith, I.H., Myster, R.W., Naumov, A., Neat, F., Nelson, J.A., Nelson, M.P., Newton, S.F., Norden, N., Oliver, J.C., Olsen, E.M., Onipchenko, V.G., Pabis, K., Pabst, R.J., Paquette, A., Pardede, S., Paterson, D.M., Pelissier, R., Penuelas, J., Perez-Matus, A., Pizarro, O., Pomati, F., Post, E., Prins, H.H.T., Priscu, J.C., Provoost, P., Prudic, K.L., Pulliainen, E., Ramesh, B.R., Ramos, O.M., Rassweiler, A., Rebelo, J.E., Reed, D.C., Reich, P.B., Remillard, S.M., Richardson, A.J., van Rijn, I., Rocha, R., Rivera-Monroy, V.H., Rixen, C., Robison, K.P., Rodrigues, R.R., Rossa-Feres, D.C., Rudstam, L., Ruhl, H., Ruz, C.S., Sampaio, E.M., Rybicki, N., Rypel, A., Sal, S., Salgado, B., Santos, F.A.M., Savassi-Coutinho, A.P., Scanga, S., Schmidt, J., Schooley, R., Setiawan, F., Shao, K.T., Shaver, G.R., Sherman, S., Sherry, T.W., Sicinski, J., Sievers, C., da Silva, A.C., da Silva, F.R., Silveira, F.L., Slingsby, J., Smart, T., Snell, S.J., Soudzilovskaia, N.A., Souza, G.B.G., Souza, F.M., Souza, V.C., Stallings, C.D., Stanforth, R., Stanley, E.H., Sterza, J.M., Stevens, M., Stuart-Smith, R., Suarez, J.M., Supp, S., Tamashiro, J.Y., Tarigan, S., Thiede, G.P., Thorn, S., Tolvanen, A., Toniato, M.T.Z., Totland, O., Twilley, R.R., Vaitkus, G., Valdivia, N., Ballejo, M.I., Valone, T.J., Van Colen, C., Vanaverbeke, J., Venturoli, F., Verheye, H.M., Vianna, M., Vieira, R.P., Vrska, T., Vu, C.Q., Vu, L.V., Waide, R.B., Waldock, C., Watts, D., Webb, S., Wesotowski, T., White, E.P., Widdicombe, C.E., Wilgers, D., Williams, R., Williams, S.B., Williamson, M., Willig, M.R., Willis, T.J., Wipf, S., Woods, K.D., Woehler, E.J., Zawada, K., Zettler, M.L., (2018). BioTIME - A time-series database for the Anthropocene Global Ecology and Biogeography 760-786. http://doi.org/10.1111/geb.12729
Albright, R., Takeshita, Y., Koweek, D.A., Ninokawa, A., Wolfe, K., Rivlin, T., Nebuchina, Y., Young, J., Caldeira, K, (2018). Carbon dioxide addition to coral reef waters suppresses net community calcification Nature, 555, 516-519. http://doi.org/10.1038/nature25968
Arranz, P., Benoit-Bird, K.J., Southall, B.L., Calambokidis, J., Friedlander, A.S., Tyack, P.L., (2018). Risso's dolphins plan foraging dives Journal of Experimental Biology . https://doi.org/10.1242/jeb.165209

2017

Thomas, K. N., Robison, B. H., Johnsen, S., (2017). Two eyes for two purposes: in situ evidence for asymmetric vision in the cockeyed squids Histioteuthis heteropsis and Stigmatoteuthis dofleini Philosophical Transactions B, 372, 1-9. http://dx.doi.org/10.1098/rstb.2016.0069
Webb, Thomas J., Barry, James P., McClain, Craig R., (2017). Abundance-occupancy relationships in deep sea wood fall communities Ecography . http://dx.doi.org/10.1111/ecog.02618
Williams, N. L., Juranek, L. W., Feely, R. A., Johnson, K. S., Sarmiento, J. L., Talley, L. D., Dickson, A. G., Gray, A. R., Wanninkhof, R., Russell, J. L., Riser, S. C., Takeshita, Y., (2017). Calculating surface ocean pCO2 from biogeochemical Argo floats equipped with pH: An uncertainty analysis Global Biogeochemical Cycles, 31, 591-604. http://dx.doi.org/10.1002/2016GB005541
Zhang, Yanwu, Kieft, Brian, Stanway, M. Jordan, McEwen, Robert S., Hobson, Brett W., Bellingham, James G., Ryan, John P., O'Reilly, Thomas C., Raanan, Ben Y., Messié, Monique, Smith, Jason M., Chavez, Francisco P., (2017). Isotherm tracking by an autonomous underwater vehicle in drift mode IEEE Journal of Oceanic Engineering , 42, 808-817. http://dx.doi.org/10.1109/JOE.2016.2625058
Thistle, David, Sedlacek, Linda, Carman, Kevin R., Barry, James P., (2017). Influence of habitat heterogeneity on the community structure of deep-sea harpacticoid communities from a canyon and an escarpment site on the continental rise off California Deep Sea Research Part I: Oceanographic Research Papers . http://dx.doi.org/10.1016/j.dsr.2017.03.005
Smith Jr., K.L., Sherman, A.D., McGill, P.R., Henthorn, R.G., Ferreira, J., Huffard, C.L., (2017). Evolution of monitoring an abyssal time-​series station in the northeast Pacific over 28 years Oceanography, 30, 72-81. https://doi.org/10.5670/oceanog.2017.425
Straehler-Pohl, I., Matsumoto, G.I., Acevendo, M., (2017). Recognition of the Californian cubozoan population as a new species – Carybdea confusa n. sp. (Cnidaria, Cubozoa, Carybdeida) Plankton and Benthos Research, 12, 129-138. http://doi.org/10.3800/pbr.12.129
Sutton, Tracey T., Clark, Malcolm R. az, Dunn, Daniel C., Halpin, Patrick N., Rogers, Alex D., Guinotte, John, Bograd, Steven J., Angel, Martin V., Perez, Jose Angel A., Wishner, Karen, Haedrich, Richard L., Lindsay, Dhugal J., Drazen, Jeffrey C., Vereshchaka, Alexander, Piatkowski, Uwe, Morato, Telmo, Błachowiak-Samołyk, Katarzyna, Robison, Bruce H., Gjerde, Kristina M., Pierrot-Bults, Annelies, Bernal, Patricio, Reygondeau, Gabriel, Heino, Mikko, (2017). A global biogeographic classification of the mesopelagic zone Deep Sea Research Part I: Oceanographic Research Papers . http://dx.doi.org/10.1016/j.dsr.2017.05.006
Symons, W. O., Sumner, E. J., Paull, C. K., Cartigny, M. J. B., Xu, J. P., Maier, K. L., Lorenson, T. D., Talling, P. J., (2017). A new model for turbidity current behavior based on integration of flow monitoring and precision coring in a submarine canyon Geology, 45, 367-370. http://dx.doi.org/10.1130/G38764.1
Tagliabue, A., Bowie, A. R., Boyd, P. W., Buck, K. N., Johnson, K. S., Saito, M. A., (2017). The integral role of iron in ocean biogeochemistry Nature, 543, 51-59. http://dx.doi.org/10.1038/nature21058
Takeshita, Y., (2017). Understanding feedbacks between ocean acidification and coral reef metabolism Journal of Geophyiscal Research: Oceans, 122, 1639-1642. http://doi.org/10.1002/2017JC012740
Scholin, C.A., Birch, J., Jensen, S., Marin III, R., Massion, E., Pargett, D., Preston, C., Roman, B., Ussler III, W., (2017). The quest to develop ecogenomic sensors: A 25-Year history of the Environmental Sample Processor (ESP) as a case study Oceanography, 30, 100-113. https://doi.org/10.5670/oceanog.2017.427
Sherlock, R. E., Walz, K. R., Schlining, K. L., Robison, B. H., (2017). Morphology, ecology, and molecular biology of a new species of giant larvacean in the eastern North Pacific: Bathochordaeus mcnutti sp. nov. Marine Biology, 164, 20. http://dx.doi.org/10.1007/s00227-016-3046-0
Sato, M., Benoit-Bird, K.J., (2017). Spatial variability of deep scattering layers shapes the Bahamian mesopelagic ecosystem Marine Ecology Progress Series, 580, 69-82. https://doi.org/10.3354/meps12295
Schoening, Timm, Durden, Jennifer, Preuss, Inken, Branzan Albu, Alexandra, Purser, Autun, De Smet, Bart, Dominguez-Carrió, Carlos, Yesson, Chris, de Jonge, Daniëlle, Lindsay, Dhugal, Schulz, Jan, Möller, Klas Ove, Beisiegel, Kolja, Kuhnz, Linda, Hoeberechts, Maia, Piechaud, Nils, Sharuga, Stephanie, Treibitz, Tali, (2017). Report on the Marine Imaging Workshop 2017 Research Ideas and Outcomes, 3, e13820. https://doi.org/10.3897/rio.3.e13820
Sakamoto, Carole M., Johnson, Kenneth S., Coletti, Luke J., Jannasch, Hans W., (2017). Pressure correction for the computation of nitrate concentrations in seawater using an in situ ultraviolet spectrophotometer Limnology and Oceanography: Methods . http://dx.doi.org/10.1002/lom3.10209
Sakamoto, C.M., Johnson, K.S., Coletti, L.J., Maurer, T.L., Massion, G., Pennington, J.T., Plant, J.N., Jannasch, H.W., Chavez, F.P., (2017). Hourly in situ nitrate on a coastal mooring: A 15-year record and insights into new production Oceanography, 30, 114-127. https://doi.org/10.5670/oceanog.2017.428
Sanborn, Kelsey L., Webster, Jody M., Yokoyama, Yusuke, Dutton, Andrea, Braga, Juan C., Clague, David A., Paduan, Jennifer B., Wagner, Daniel, Rooney, John J., Hansen, John R., (2017). New evidence of Hawaiian coral reef drowning in response to meltwater pulse-1A Quaternary Science Reviews, 175, 60-72. https://doi.org/10.1016/j.quascirev.2017.08.022
Oju, B., Oka, E., Bishop, S.P., Chen, S., Fassbender, A.J., (2017). Decadal variability of the Kuroshio Extension system and its impact on subtropical mode water formation US CLIVAR Variations: Frontiers in western boundary current research, 15, 11-16. http://doi.org/10.5065/D6SJ1JB2
Raanan, B.Y., Bellingham, J., Zhang, Y., Kemp, M., Kieft, B., Singh, H., Girdhar, Y., (2017). Detection of Unanticipated Faults for Autonomous Underwater Vehicles using Online Topic Models Journal of Field Robotics, 00, 1-13. https://doi.org/10.1002/rob.21771

2016

Zhang, Y., Bellingham, J.G., Ryan, J.P., Kieft, B., Stanway, M. J., (2016). Autonomous four-dimensional mapping and tracking of a coastal upwelling front by an autonomous underwater vehicle Journal of Field Robotics, 33, 67-81. http://dx.doi.org/10.1002/rob.21617
Zhang, Y., Kieft, B., Rueda, C., O'Reilly, T., Ryan, J., Maughan, T., Wahl, C., Chavez, F., (2016). Autonomous front tracking by a Wave Glider Marine Technology Society / Institute of Electrical and Electronics Engineers Oceans Conference . http://dx.doi.org/10.1109/OCEANS.2016.7761070
Ziccarelli, Lisa, Dellor, Roger, Johnson, Richard, Schmitz, Heike, O'Reilly, Tom, Chavez, Francisco, (2016). A novel method of obtaining near real-time observations of phytoplankton from a mobile autonomous platform Marine Technology Society / Institute of Electrical and Electronics Engineers Oceans Conference 1-5. http://dx.doi.org/10.1109/OCEANS.2016.7761230
Williams, N. L., Juranek, L. W., Johnson, K. S., Feely, R. A., Riser, S. C., Talley, L. D., Russell, J. L., Sarmiento, J. L., Wanninkhof, R., (2016). Empirical algorithms to estimate water column pH in the Southern Ocean Geophysical Research Letters, 43, 3415-3422. http://dx.doi.org/10.1002/2016GL068539
Worden, A. Z., Wilken, S., (2016). A plankton bloom shifts as the ocean warms Science, 354, 287-288. http://dx.doi.org/10.1126/science.aaj1751
van Baren, Marijke J., Bachy, Charles, Reistetter, Emily Nahas, Purvine, Samuel O., Grimwood, Jane, Sudek, Sebastian, Yu, Hang, Poirier, Camille, Deerinck, Thomas J., Kuo, Alan, Grigoriev, Igor V., Wong, Chee-Hong, Smith, Richard D., Callister, Stephen J., Wei, Chia-Lin, Schmutz, Jeremy, Worden, Alexandra Z., (2016). Evidence-based green algal genomics reveals marine diversity and ancestral characteristics of land plants BMC Genomics, 17, 1-22. http://dx.doi.org/10.1186/s12864-016-2585-6
Waldmann, C., Kier, T.M., Kirkwood, W.S., Meckel, S., (2016). Performance data of a pneumatic variable buoyancy engine for a newly designed underwater glider Marine Technology Society / Institute of Electrical and Electronics Engineers Oceans Conference . http://dx.doi.org/10.1109/OCEANS.2016.7761225
Waltman, P. H., Guo, J., Reistetter, E. N., Purvine, S., Ansong, C. K., van Baren, M. J., Wong, C. H., Wei, C. L., Smith, R. D., Callister, S. J., Stuart, J. M., Worden, A. Z., (2016). Identifying aspects of the post-transcriptional program governing the proteome of the green alga Micromonas pusilla PLoS One, 11, e0155839. http://dx.doi.org/10.1371/journal.pone.0155839
Simmons, M. P., Sudek, S., Monier, A., Limardo, A. J., Jimenez, V., Perle, C. R., Elrod, V. A., Pennington, J. T., Worden, A. Z., (2016). Abundance and biogeography of picoprasinophyte ecotypes and other phytoplankton in the Eastern North Pacific Ocean Applied and Environmental Microbiology, 82, 1693-1705. http://dx.doi.org/10.1128/AEM.02730-15
Smith Jr., K.L., Huffard, C.L., Sherman, A.D., Ruhl, H.A., (2016). Decadal change in sediment community oxygen consumption in the abyssal northeast Pacific Aquatic Geochemistry, 22, . http://dx.doi.org/10.1007/s10498-016-9293-3
Stocks, K., Jacobsen Stout, N, Shanks ,T.M. , (2016). Information management strategies for deep‐sea biology Biological Sampling in the Deep Sea 368-385.
Sunday, Jennifer M., Fabricius, Katharina E., Kroeker, Kristy J., Anderson, Kathryn M., Brown, Norah E., Barry, James P., Connell, Sean D., Dupont, Sam, Gaylord, Brian, Hall-Spencer, Jason M., Klinger, Terrie, Milazzo, Marco, Munday, Philip L., Russell, Bayden D., Sanford, Eric, Thiyagarajan, Vengatesen, Vaughan, Megan L. H., Widdicombe, Stephen, Harley, Christopher D. G., (2016). Ocean acidification can mediate biodiversity shifts by changing biogenic habitat Nature Climate Change, 7, 81-85. http://dx.doi.org/10.1038/nclimate3161
Takeshita, Yuichiro, Martz, Todd R., Coletti, Luke J., Dickson, Andrew G., Jannasch, Hans W., Johnson, Kenneth S., (2016). The effects of pressure on pH of Tris buffer in synthetic seawater Marine Chemistry, 188, 1-5. http://dx.doi.org/10.1016/j.marchem.2016.11.002
Thys, Tierney, Ryan, John P., Weng, Kevin C., Erdmann, Mark, Tresnati, Joeharnani, (2016). Tracking a marine ecotourism star: Movements of the short ocean sunfish Mola ramsayi in Nusa Penida, Bali, Indonesia Journal of Marine Biology, 3, 1-6. http://dx.doi.org/10.1155/2016/8750193
Santoferrara, L. F., Bachy, C., Alder, V. A., Gong, J., Kim, Y. O., Saccá, A., da Silva Neto, I. D., Struder-Kypke, M. C., Warren, A., Xu, D., Yi, Z., Agatha, S., (2016). Updating biodiversity studies in loricate protists: The case of the Tintinnids (Alveolata, Ciliophora, Spirotrichea) Journal of Eukaryotic Microbiology, 63, 651-656. http://dx.doi.org/10.1111/jeu.12303
Shafait, Faisal, Mian, Amal, Shortis, Mark, Ghanem, Bernard, Culverhouse, P.F., Edgington, D., Cline, D., Ravanbakskh, M., Seager, J., Harvey, E.S., (2016). Fish identification from videos captured in uncontrolled underwater environments ICES Journal of Marine Science, 73, 2737-2746 . http://dx.doi.org/10.1093/icesjms/fsw106
Sherlock, R. E., Walz, K. R., Robison, B. H., (2016). The first definitive record of the giant larvacean, Bathochordaeus charon, since its original description in 1900 and a range extension to the northeast Pacific Ocean Marine Biodiversity Records, 9, . http://dx.doi.org/10.1186/s41200-016-0075-9
Sickmann, Z., Paull, C. K., Graham, S.A., (2016). Detrital-zircon mixing and partitioning in fluvial to deep marine systems, central California, U.S.A. Journal of Sedimentary Research (SEPM), 86, 1298-1307. http://dx.doi.org/10.2110/jsr.2016.78
Ryan, J., Cline, D., Dawe, C., McGill, P., Zhang, Y., Joseph, J., Margolina, T., Caillat, M., Fischer, M., DeVogelaere, A., Stimpert, A., Southall, B., (2016). New passive acoustic monitoring in Monterey Bay National Marine Sanctuary: Exploring natural and anthropogenic sounds in a deep soundscape Marine Technology Society / Institute of Electrical and Electronics Engineers Oceans Conference .
Raanan, B.Y., Bellingham, J.G., Zhang, Y., Kemp, M., Kieft, B., Singh, H., Girdhar, Y., (2016). Automatic fault diagnosis for autonomous underwater vehicles using online topic models OCEANS 2016 MTS/IEEE Monterey . http://dx.doi.org/10.1109/OCEANS.2016.7761139

2015

Zhang, Yanwu, Bellingham, James G., Ryan, John P., Godin, Michael A., (2015). Evolution of a physical and biological front from upwelling to relaxation Continental Shelf Research, 108, 55-64. http://dx.doi.org/10.1016/j.csr.2015.08.005
Zhang, Y., Kieft, B., McEwen, R., Stanway, M.J., Bellingham, J. , Ryan, J., Hobson, B., Pargett, D., Birch, J., Scholin, C., (2015). Tracking and sampling of a phytoplankton patch by an autonomous underwater vehicle in drifting mode Proceedings of the Marine Technology Society / Institute of Electrical and Electronics Engineers Oceans Conference 1-5.
Zhang, H., Johnson, S.B., Flores, V.R., Vrijenhoek, R.C., (2015). Intergradation between discrete lineages of Tevnia jerichonana, a deep-sea hydrothermal vent tubeworm Deep-Sea Research Part II: Topical Studies in Oceanography, 121, 53-61. http://dx.doi.org/10.1016/j.dsr2.2015.04.028
Yamahara, K.M., Demir-Hilton, E., Preston, C.M., Marin, R., 3rd, Pargett, D., Roman, B., Jensen, S., Birch, J.M., Boehm, A.B., Scholin, C.A., (2015). Simultaneous monitoring of faecal indicators and harmful algae using an in-situ autonomous sensor Letters in Applied Microbiology, 61, 130-138. http://dx.doi.org/10.1111/lam.12432
Young, J.W., Hunt, B.P.V., Cook, T.R., Llopiz, J.K., Hazen, E.L., Pethybridge, H.R., Ceccarelli, D., Lorrain, A., Olson, R.J., Allain, V., Menkes, C., Patterson, T., Nicol, S., Lehodey, P., Kloser, R.J., Arrizabalaga, H., Choy, C.A., (2015). The trophodynamics of marine top predators: Current knowledge, recent advances and challenges Deep Sea Research Part II: Topical Studies in Oceanography, 113, 170-187. http://dx.doi.org/10.1016/j.dsr2.2014.05.015
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