2011 Castro, C. G., C. A. Collins, et al. "Spatial distribution and offshore export of total organic carbon along the eastern boundary of the Subtropical North Pacific." Advances in Oceanography and Limnology 2(2): 93-106.

2011 Chavez, F. P., M. Messié, et al. "Marine primary production in relation to climate variability and change." Annual Review of Marine Science(3): 227-260.

2011 Das, J., T. Maughan, et al. Towards mixed-initiative, multi-robot field experiments: design, deployment, and lessons learned. International Conference on Intelligent Robots and Systems (IROS), San Francisco, USA.

2011 Gray, S. E. C., M. D. DeGrandpre, et al. "Applications of in situ pH measurements for inorganic carbon calculations." Marine Chemistry 125(1-4): 82-90.

2011 Messie, M. and F. Chavez. "Global Modes of Sea Surface Temperature Variability in Relation to Regional Climate Indices." Journal of Climate 24(16): 4314-4331.

2011 Paerl, R. W., K. S. Johnson, et al. "Differential distributions of Synechococcus subgroups across the California current system." Frontiers in Microbiology (2): 1-22.

2010 Bjorkstedt, E. P., R. Goericke, et al. "State of the California current 2009-2010: Regional variation persists through transition from la Niña to el Niño (and back?)." California Cooperative Oceanic Fisheries Investigations Reports 51: 39-69.

2010 Cuvelier, M. L., A. E. Allen, et al. "Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton." Proceedings of the National Academy of Sciences of the United States of America 107(33): 14679-14684.

2010 Knepp, T. N., J. Bottenheim, et al. "Development of an autonomous sea ice tethered buoy for the study of ocean-atmosphere-sea ice-snow pack interactions: the O-buoy." Atmospheric Measurement Techniques 3(1): 249-261.

2010 Lester, S. E., K. L. McLeod, et al. "Science in support of ecosystem-based management for the US West Coast and beyond." Biological Conservation 143(3): 576-587.

2010 Pennington, J. T., C. A. Castro, et al. A carbon budget for the northern and central California coastal upwelling system. Continental Margins Task Team The Synthesis Book.

2010 Wankel, S. D., S. B. Joye, et al. "New constraints on methane fluxes and rates of anaerobic methane oxidation in a Gulf of Mexico brine pool via in situ mass spectrometry." Deep-Sea Research Part II: Topical Studies in Oceanography 57(21-23): 2022-2029.

2009 Chao, Y. Z. L., J. Farrara, J. C. McWilliams, J. Bellingham, X. Capet, F. Chavez, J-K. Choi, R. Davis, J. Doyle, D. Frantaoni, P. Li, P. Marchesiello, M. A. Moline, J. Paduan, S. Ramp "Development, implementation and evaluation of a data-assimilative ocean forecasting system off the central California coast." Deep-Sea Research II.

2009 Chavez, F. P., C. Mauriaca, et al. "Constitutive and regulated expression vectors to construct polyphosphate deficient bacteria." BMC Research Notes 2.

2009 Chavez, F. P. and M. Messié. "A comparison of Eastern Boundary Upwelling Ecosystems." Progress in Oceanography 83(1-4): 80-96.

2009 Conaway, C. H., F. J. Black, et al. "Dimethylmercury in coastal upwelling waters, Monterey Bay, California." Environmental Science and Technology 43(5): 1305-1309.

2009 Evans, W., P. G. Strutton, et al. "Impact of tropical instability waves on nutrient and chlorophyll distributions in the equatorial Pacific." Deep-Sea Research Part I: Oceanographic Research Papers 56(2): 178-188.

2009 Freon, P. C. W., Chavez, F. P. Conjectures on the influence of climate change on ocean ecosystems dominated by small pelagic fish. Predicted effects of climate change on SPACC systems. C. R. D. Checkley, J. Alheit Cambridge, Cambridge University Press: 312-343.

2009 Gutiérrez, D., A. Sifeddine, D. B. Field, L. Ortlieb, G. Vargas, F. Chávez, F.P. Velazco, V. Ferreira, P. Tapia, R. Salvatteci, H. Boucher, M. C. Morales, J. Valdés, J.-L. Reyss, A. Campusano, M. Boussafir, M. Mandeng-Yogo, M. García, T. Baumgartner "Rapid reorganization in ocean biogeochemistry off Peru towards the end of the Little Ice Age." Biogeosciences.

2009 Haley Jr. P.J., P. F. J. L., A.R. Robinson, W.G. Leslie, O. Logoutov, G. Cossarini, X.S. Liang, P. Moreno, S.R. Ramp, J.D. Doyle, J. Bellingham, F. Chavez, S. Johnston "Forecasting and reanalysis in the Monterey Bay/California Current region for the Autonomous Ocean Sampling Network-II experiment." Deep-Sea Research II.

2009 Johnston, T. M. S., O. M. Cheriton, et al. "Thin phytoplankton layer formation at eddies, filaments, and fronts in a coastal upwelling zone." Deep-Sea Research Part II: Topical Studies in Oceanography 56(3-5): 246-259.

2009 Leinweber, A., N. Gruber, et al. "Diurnal carbon cycling in the surface ocean and lower atmosphere of Santa Monica Bay, California." Geophysical Research Letters 36(8).

2009 Messié, M., J. Ledesma, et al. "Potential new production estimates in four eastern boundary upwelling ecosystems." Progress in Oceanography 83(1-4): 151-158.

2009 Pennington, J. T., Castro, C.G., Collins, C.A., Evans, W.W. IV, Friederich, G.E., Michisaki, R.P., Chavez, F.P. . The Northern and Central California Coastal Upwelling System. Carbon and Nutrient Fluxes in Continental Margins. K.-K. Liu. Berlin Heidelberg, Springer-Verlag 25: 29-44.

2009 Quinones, R. A., M. H. Gutierrez, G. Daneri, D. Gutierrez A.,H. E. Gonzalez, F.P. Chavez. The Humboldt Current System. Carbon and Nutrient Fluxes in Continental Margins. K.-K. Liu. Berlin Heidelberg, Springer-Verlag. 25: 44-64.

2009 Ramp, S. R., R. E. Davis, et al. "Preparing to predict: The Second Autonomous Ocean Sampling Network (AOSN-II) experiment in the Monterey Bay." Deep-Sea Research Part II: Topical Studies in Oceanography 56(3-5): 68-86.

2009 Ryan, J. P., A. M. Fischer, et al. "Influences of upwelling and downwelling winds on red tide bloom dynamics in Monterey Bay, California." Continental Shelf Research 29(5-6): 785-795.

2009 Shadden, S. C., F. Lekien, et al. "The correlation between surface drifters and coherent structures based on high-frequency radar data in Monterey Bay." Deep-Sea Research Part II: Topical Studies in Oceanography 56(3-5): 161-172.

2009 Shulman, I., C. Rowley, S. Anderson, S. DeRada, J. Kindle, P. Martin, J. Doyle, J. Cummings, S. Ramp, F. Chavez, D. Fratantoni, R. Davis " Impact of glider data assimilation on the Monterey Bay model." Deep-Sea Research II.

2008 Bertrand, A., Gerlotto, F., Bertrand, S., Gutiérrez, M., Alza, L., Chipollini, A., Diaz, E., Espinoza, P., Ledesma, L., Quesquén, R., Peraltilla, S., Chavez., F.P. . "Schooling behaviour and environmental forcing in relation to anchoveta distribution: an analysis across multiple spatial scales." Progress in Oceanography 79: 264-277.

2008 Bograd, S. C. G. C., E. Di Lorenzo, D. M. Palacios, H. Bailey, W. Gilly, F P. Chavez "Oxygen declines and the shoaling of the hypoxic boundary in the California Current." Geophysical Research Letters 35: L12607.

2008 Buck, K. R., F. P. Chavez, et al. "Minidiscus trioculatus, a small diatom with a large presence in the upwelling systems of central California." Nova Hedwigia 133: 1-6.

2008 Carr, S. D., X. J. Capet, et al. "The influence of diel vertical migration on zooplankton transport and recruitment in an upwelling region: estimates from a coupled behavioral-physical model." Fisheries Oceanography 17(1): 1-15.

2008 Chavez, F. P., A. Bertrand, R. Guevara, P. Soler, J. Csirke "The northern Humboldt Current System: brief history, present status and a view towards the future. ." Progress in Oceanography 79: 95-105.

2008 Field, D. B., C. Lange, D. Cayan, F. Chavez, M. Dalton, P. Smith. Sardines and anchovies: Natural variations and fisheries in complex ocean environments. Using the Past to Inform the Future: The Known, Unknown, and Unknowable (KUU) Conference 2003. E. S. J.B.J. Jackson. Chicago, Chicago University Press.

2008 Field, D. B., T.R. Baumgartner, V. Ferreira, D. Gutierrez, H. Lozano-Montes, R. Salvatteci, and A. Soutar. Variability in small pelagic fishes from scales in marine sediments and other historical records. Climate Change and Small Pelagic Fish. D. M. Checkley, C. Roy, J. Alheit, Y. Oozeki. Cambridge, Cambridge University Press: Chapter 4.

2008 Finney, B. J. A., K.-C. Emeis, D.B. Field, D. Gutierrez, U. Struck. "Paleoecological Studies on Variability in Marine Fish Populations: A Long-Term Perspective on the Impacts of Climatic Change on Marine Fisheries." Progress in Oceanography.

2008 Friederich, G. E., J. Ledesma, O. Ulloa, F.P. Chavez "Air-Sea carbon dioxide fluxes in the coastal southeastern tropical Pacific." Progress in Oceanography 79: 156-166.

2008 Messié, M., R. Calienes, J. Ledesma, R.T. Barber, J.T. Pennington, F.P. Chavez. Physical/biological variability and interactions at the decadal scale in eastern Pacific upwelling ecosystems. CLIMECO Workshop. Poster. April 2008, Brest, France.

2008 Messié, M., R. Calienes, J. Ledesma, R.T. Barber, J.T. Pennington and F.P. Chavez. Interannual variability and long term trends in eastern Pacific upwelling ecosystems. Ocean Sciences. Presentation. Mar 2008, Orlando, Florida.

2008 Messié, M., J. Ledesma, D. Kolber, F.P. Chavez. Nitrate supply and potential primary productivity estimates in four eastern boundary upwelling systems. Eastern boundary upwelling ecosystems. Presentation. June 2008, Las Palmas, Spain.

2008 Ohman, M. D., G.E. Durbin, J. Runge, B.K. Sullivan, D.B. Field. "Relationship of predation potential to mortality of Calanus finmarchicus on Georges Bank, northwest Atlantic." Limnology and Oceanography 53(4): 1643-1655.

2008 Rienecker, E., J. Ryan, M. Blum, C. Dietz, L. Coletti, R. Marin III, W. P. Bissett "Mapping phytoplankton in situ using a laser scattering sensor." Limnology and Oceanography, Methods 6: 153-161.

2008 Rienecker, E. Intermediate Nepheloid Layers in the Central California Coastal Zone. Eastern boundary upwelling ecosystems. Presentation. June 2008, Las Palmas, Spain.

2008 Ryan, J. P., J. F. R. Gower, S. A. King, W. P. Bissett, A. M. Fischer, R. M. Kudela, Z. Kolber, F. Mazzillo, E. V. Rienecker, F. P. Chavez "A coastal ocean extreme bloom incubator." Geophysical Research Letters 35: L12602.

2008 Ryan, J. P., M. A. McManus, et al. "Phytoplankton thin layers caused by shear in frontal zones of a coastal upwelling system." Marine Ecology-Progress Series 354: 21-34.

2008 Saba, V. S., J. R. Spotila, et al. "Bottom-up and climatic forcing on the worldwide population of leatherback turtles." Ecology 89(5): 1414-1427.

2008 Sifeddine, A., D. Gutierrez, L. Ortlieb, H. Boucher, F. Velazco, D.B. Field, G. Vargas, M. Boussafir, R. Salvatteci, V. Ferreira, M. García, J. Valdes, S. Caquineau, M. Mandeng Yogo, F. Cetin, J. Solis, P. Soler, T. Baumgartner. "Changes in terrestrial runoff, water mass oxygenation and upwelling productivity recorded in laminated sediments off the Central Peruvian Coast spanning the last centuries." Progress in Oceanography.

2008 Strutton, P. G., W. Evans, et al. "Equatorial Pacific chemical and biological variability, 1997-2003." Global Biogeochemical Cycles 22(2).

2008 Takahashi, T. S. C. S., R. Wanninkhof, C. Sweeney, R. A. Feely, D. W. Chipman, B. Hales, G. Friederich, F. P. Chavez, C. Sabine, A. Watson, D. C. E. Bakker, U. Schuster, N. Metzl, H. Yoshikawa-Inoue, Masao Ishii, T. Midorikawa, Y. Nojiri, A. Körtzinger, T. Steinhoff, M. Hoppema, J. Olafsson, T. S. Arnarson, B. Tilbrook, T. Johannessen, A. Olsen, R. Bellerby, C. S. Wong, Bruno Delille, N. R. Bates, H. J. W. de Baar "Climatological Mean and Decadal Change in Surface Ocean pCO₂, and Net Sea-air CO₂ Flux over the Global Oceans." Deep-Sea Research II.

2007 Chai, F., M. S. Jiang, et al. "Modeling responses of diatom productivity and biogenic silica export to iron enrichment in the equatorial Pacific Ocean." Global Biogeochemical Cycles 21(3).

2007 Chavez, F. P. Variability, Multidecadal. Encyclopedia of Tidepools & Rocky Shores. M. W. Denny, Gaines, S. D. Berkeley, University of California Press: 608-611.

2007 Chavez, F. P., T. Takahashi, et al. Coastal Oceans. The First State of the Carbon Cycle Report (SOCCR): The North American Carbon Budget and Implications for the Global Carbon Cycle. A. W. King, L. Dilling, G. P. Zimmermanet al. National Climatic Data Center, Asheville, NC, USA,, A Report by the U.S. Climate Change Science Program and the Subcommittee on Global Change Research[National Oceanic and Atmospheric Administration,]: 157-166.

2007 De La Cruz-Orozco, M. E., G. Gaxiola-Castro, J. Garcia-Cordova, G. Friederich, F. Chavez, J.Gomez-Valdes Presion parcial del bioxido de carbono (pCO2) frente a Baja California. Mexico, Instituto National Ecological, Mexico, DF.

2007 Fischer, A., Ryan, J., Rienecker, E. Tidally-forced exchange between Elkhorn Slough and Monterey Bay. EPOC. Presentation. September, Leavenworth, WA.

2007 Osborn, D. A., M. W. Silver, et al. "The habitat of mesopelagic scyphomedusae in monterey bay, California." Deep-Sea Research Part I-Oceanographic Research Papers

Deep-Sea Res. Part I-Oceanogr. Res. Pap. 54(8): 1241-1255.

2007 Rago, T., R. P. Michisaki, et al. Physical, Nutrient, and Biological Measurements of Coastal Water off Central California in June/July 2006. Monterey, California, Naval Postgraduate School.

2007 Rago, T., R. P. Michisaki, et al. Physical, Nutrient, and Biological Measurements of Coastal Water off Central California in October 2006. Monterey, California, Naval Postgraduate School.

2007 Shulman, I., J. Kindle, et al. "Modeling of upwelling/relaxation events with the Navy Coastal Ocean Model." Journal of Geophysical Research-Oceans 112(C6).

2007 Wankel, S. D., C. Kendall, et al. "Nitrification in the euphotic zone as evidenced by nitrate dual isotopic composition: Observations from Monterey Bay, California." Global Biogeochemical Cycles 21(2): 13.