Altabet, M. A., C.
Pilskaln, R. Thunell, C. Pride, D. Sigman, F. Chavez, and R. Francois, 1999:
The nitrogen isotope biogeochemistry of sinking particles from the margin of
the Eastern North Pacific. Deep-Sea Research Part I-Oceanographic Research
Papers, 46, 655-679.
Anbar, A. D., Y. L.
Yung, and F. P. Chavez, 1996: Methyl bromide: Ocean sources, ocean sinks, and
climate sensitivity. Global Biogeochemical Cycles, 10, 175-190.
Angel, M. V., M. A.
Baars, R. T. Barber, F. P. Chavez, M. Kastner, M. Leinen, J. R. E. Lutjeharms,
G. Reverdin, and G. B. Shimmield, 1995: Group report: How do open ocean
upwelling systems operate as integrated physical, chemical, and biological
systems and influence the geological record? Upwelling in the ocean: Modern
processes and ancient records, C. P. Summerhayes, K.-C. Emeis, M. V. Angel, R.
L. Smith, and B. Zeitzschel, Eds., John Wiley & Sons, 193-220.
Bac, M. G., K. R. Buck,
F. P. Chavez, and S. C. Brassell, 2003: Seasonal variation in alkenones, bulk
suspended POM, plankton and temperature in
Barber, R. T. and F. P.
Chavez, 1983: Biological consequences of El Niño. Science, 1203-1210.
Barber, R. T., J. E. Kogelschatz,
and F. P. Chavez, 1985: Origin of the biological anomalies during the 1982/83
El Niño.
Barber, R. T. and F. P.
Chavez, 1986: Ocean variability in relation to living resources during the
1982-83 El Niño. Nature, 319, 279-285.
——, 1991: Regulation of
primary productivity rate in the equatorial
Barber, R. T., M. P.
Sanderson, S. T. Lindley, F. Chai, J. Newton, C. C. Trees, D. G. Foley, and F.
P. Chavez, 1996: Primary productivity and its regulation in the equatorial
Pacific during and following the 1991-1992 El Niño. Deep-Sea Research II, 43,
933-969.
Barber, R. T., F P
Chavez, 1998: The Signature of El Niño and La Niña in Physical Conditions and
Anchovy Catch in the Coastal Upwelling. EOS Transactions, American Geophysical
Barber, R., R. Smith, R.
Dugdale, F. Chai, Y. Chao, F. Chavez, J. O'Brien, and C. Mooers, 2006: Coastal
Upwelling Research Is Poised to Improve the Management and Conservation of Fish
Resources Dramatically. Ocean Science Conference,
Bates, T. S., R. P.
Kiene, G. V. Wolfe, P. A. Matrai, F. P. Chavez, K. R. Buck, B. W. Blomquist,
and R. L. Cuhel, 1994: The cycling of sulfur in surface seawater of the
northeast Pacific. Journal of Geophysical Research, 99, 7835-7843.
Behrenfeld, M. J., K.
Worthington, R. M. Sherrell, F. P. Chavez, P. Strutton, M. McPhaden, and D. M.
Shea, 2006: Controls on tropical
Béjà, O., M. T. Suzuki,
E. V. Koonin, L. Aravind, A. Hadd, L. P. Nguyen, R. Villacorta, M. Amjadi, C.
Garrigues, S. B. Jovanovich, R. A. Feldman, and E. F. DeLong, 2000: Construction
and analysis of bacterial artificial chromosome libraries from a marine
microbial assemblage. Environmental Microbiology, 2, 516-529.
Béjà, O., L. Aravind, E.
V. Koonin, M. T. Suzuki, A. Hadd, L. P. Nguyen, S. Jovanovich, C. M. Gates, R.
A. Feldman, J. L. Spudich, E. N. Spudich, and E. F. DeLong, 2000: Bacterial
rhodopsin: Evidence for a new type of phototrophy in the sea. Science, 289,
1902-1906.
Béjà, O., E. N. Spudich,
J. L. Spudich, M. Leclerc, and E. F. DeLong, 2001: Proteorhodopsin phototrophy
in the ocean. Nature, 411, 786-789.
Benson, S. R., D. A.
Croll, B. B. Marinovic, F. P. Chavez, and J. T. Harvey, 2002: Changes in the
cetacean assemblage of a coastal upwelling ecosystem during El Niño 1997-98 and
La Nina 1999. Progress in Oceanography, 54, 279-291.
Berelson, W., J.
McManus, K. Coale, K. S. Johnson, D. Burdidge, T. Kilgore, D. Colodner, F. P.
Chavez, R. Kudela, and J. Boucher, 2003: A time series of benthic flux
measurements from
Berger, W. H. and C. B.
Lange, 1998: Silica depletion in the thermocline of the glacial North Pacific;
corollaries and implications [Monograph] Topical studies in oceanography;
studies of the California current system; Part 1. F. P. Chavez and C. A.
Collins, Eds.
Bertrand, A., Gerlotto,
F., Bertrand, S., Gutiérrez, M., Alza, L., Chipollini, A., Diaz, E., Espinoza,
P., Ledesma, L., Quesquén, R., Peraltilla, S., Chavez., F.P. , 2008: Schooling
behaviour and environmental forcing in relation to anchoveta distribution: an
analysis across multiple spatial scales. Progress in Oceanography, 79, 264-277.
Bertrand, A., A.
Chaigneau, S. Peraltilla, J. Ledesma, M. Graco, F. Monetti, and F. P. Chavez,
2012: Oxygen: A Fundamental Property Regulating Pelagic Ecosystem Structure in
the Coastal Southeastern Tropical Pacific. Plos One, 6, 8.
Bjorkstedt, E. P., R.
Goericke, S. McClatchie, E. Weber, W. Watson, N. Lo, B. Peterson, B. Emmett, J.
Peterson, R. Durazo, G. Gaxiola-Castro, F. Chavez, J. T. Pennington, C. A.
Collins, J. Field, S. Ralston, K. Sakuma, S. J. Bograd, F. B. Schwing, Y. Xue,
W. J. Sydeman, S. A. Thompson, J. A. Santora, J. Largier, C. Halle, S. Morgan,
S. Y. Kim, K. P. B. Merkens, J. A. Hildebrand, and L. M. Munger, 2010: State of
the California current 2009-2010: Regional variation persists through
transition from la Niña to el Niño (and back?).
Bjorkstedt. E., R.
Goericke, S. McClatchie, F. P. Chavez, E. Weber, W. Watson, N. Lo, B. Peterson,
B. Emmett, R. Brodeur, J. Peterson, M. Litz, J. Gomez-Valdez, G.
Gaxiola-Castro, B. Lavaniegos, C. A. Collins, J. Field, K. Sakuma, P. Warzybok,
R. Bradley, J. Jahncke, S. Bograd, F. Schwing, G. S. Campbell, J. Hildebrand,
W. Sydeman, S. A. Thompson, J. Largier, C. Halle, S. Y. Kim, and J. Abell,
2011: State of the California Current 2010-2011. Regionally variable responses
to a strong (but fleeting?) La Niña.
Bograd, S. C. G. C., E.
Di Lorenzo, D. M. Palacios, H. Bailey, W. Gilly, F P. Chavez 2008: Oxygen
declines and the shoaling of the hypoxic boundary in the California Current.
Geophysical Research Letters, 35, L12607.
Brzezinski, M. A., D. R.
Phillips, F. P. Chavez, G. E. Friederich, and R. C. Dugdale, 1997: Silica
production in the
Buck, K. R., F. P.
Chavez, and H. A. Thomsen, 1991: Choanoflagellates of the central
Buck, K. R., L.
Uttal-Cooke, C. H. Pilskaln, D. L. Roelke, M. C. Villac, G. A. Fryxell, L.
Cifuentes, and F. P. Chavez, 1992: Autecology of the diatom Pseudonitzschia
australis, a domoic acid producer, from Monterey Bay, California. Marine
Ecology Progress Series, 84, 293-302.
Buck, K. R. and F. P.
Chavez, 1994: Diatom aggregates from the open ocean. Journal of Plankton
Research, 16, 1449-1457.
Buck, K. R., F. P.
Chavez, and L. Campbell, 1996: Basin-wide distributions of living carbon
components and the inverted trophic pyramid of the central gyre of the
Buck, K. R., R. Marin,
and F. P. Chavez, 2005: Heterotrophic dinoflagellate fecal pellet production:
grazing of large, chain-forming diatoms during upwelling events in
Buck, K. R., F. P.
Chavez, and A. S. Davis, 2008: Minidiscus trioculatus, a small diatom with a
large presence in the upwelling systems of central
Carr, S. D., X. J.
Capet, J. C. McWilliams, J. T. Pennington, and F. P. Chavez, 2008: The
influence of diel vertical migration on zooplankton transport and recruitment
in an upwelling region: estimates from a coupled behavioral-physical model.
Fisheries Oceanography, 17, 1-15.
Castro, C. G., F. P.
Chavez, and C. Collins, 2001: The role of the California Undercurrent in the
export of denitrified waters from the eastern tropical North Pacific. Global
Biogeochemical Cycles, 21, 819-830.
Castro, C. G., C. A.
Collins, P. Walz, J. T. Pennington, R. P. Michisaki, G. Friederich, and F. P.
Chavez, 2002: Nutrient variability during El Niño 1997-98 in the California
current system off central California. Progress in Oceanography, 54, 171-184.
Castro, C. G., T. R.
Baumgartner, S. Bograd, R. Castro, F. P. Chavez, C. A. Collins, R. Durazo, J.
Garcy'a, G. Gaxiola-Castro, T. Hayward, A. Huyer, R. Lynn, A. S. Mascarenhas,
M. R. D. Robert, R. L. Smith, P. A. Wheeler, and F. A. Whitney, 2002:
Introduction to 'The 1997-8 El Niño Atlas of oceanographic conditions along the
west coast of North America (23°N-50°N). Progress in Oceanography, 54, 501-508.
Castro, C. G., C. A.
Collins, J. T. Pennington, D. Zúñiga, and F. P. Chavez, 2011: Spatial
distribution and offshore export of total organic carbon along the eastern
boundary of the Subtropical North Pacific. Advances in Oceanography and
Limnology, 2, 93-106.
Chai, F., M. S. Jiang,
Y. Chao, R. C. Dugdale, F. Chavez, and R. T. Barber, 2007: Modeling responses
of diatom productivity and biogenic silica export to iron enrichment in the
equatorial
Chao, Y., Z. J. Li, J.
C. Kindle, J. D. Paduan, and F. P. Chavez, 2003: A high-resolution surface
vector wind product for coastal oceans: Blending satellite scatterometer
measurements with regional mesoscale atmospheric model simulations. Geophysical
Research Letters, 30, 1013.
Chao, Y. Z. L., J.
Farrara, J. C. McWilliams, J. Bellingham, X. Capet, F. Chavez, J-K. Choi, R.
Davis, J. Doyle, D. Frantaoni, P. Li, P. Marchesiello, M. A. Moline, J. Paduan,
S. Ramp 2009: Development, implementation and evaluation of a data-assimilative
ocean forecasting system off the central
Chavez, F. P., R. T.
Barber, and H. Soldi S., 1984: Propagated temperature changes during onset and
recovery of the 1982-83 El Niño. Nature, 309, 47-49.
Chavez, F. P. and R. T. Barber,
1985: Plankton production during El Niño. International Conference on the TOGA
Scientific Programme,
——, 1987: An estimate of
new production in the equatorial Pacific. Deep-Sea Research, 34, 1229-1243.
Chavez, F. P., 1987:
Ocean variability and phytoplankton community structure,
Chavez, F. P., R. T.
Barber, and M. P. Sanderson, 1989: The potential primary production of the
Peruvian upwelling ecosystem, 1953-1984. The Peruvian upwelling ecosystem:
Dynamics and interactions, D. Pauly, P. Muck, J. Mendo, and I. Tsukayama, Eds.,
International Center for Living Aquatic Resources Management, 50-63.
Chavez, F. P., 1989:
Size distribution of phytoplankton in the central and eastern tropical Pacific.
Global Biogeochemical Cycles, 3, 27-35.
Chavez, F. P., G.
Thurmond, A. Pearce, S. P. Hayes, and H. Milburn, 1990: Physical and biological
coupling in
Chavez, F. P., K. R.
Buck, and R. T. Barber, 1990: Phytoplankton taxa in relation to primary
production in the equatorial Pacific. Deep-Sea Research, 37, 1733-1752.
Chavez, F. P., 1990:
Primary production in
Chavez, F. P., H. W.
Jannasch, K. S. Johnson, C. M. Sakamoto, G. E. Friederich, G. D. Thurmond, R.
A. Herlien, and L. A. Codispoti, 1991: The MBARI program for obtaining
real-time measurements in
Chavez, F. P., K. R.
Buck, C. H. Pilskaln, J. N. Downs, N. A. Welschmeyer, R. A. Olivieri, A.
Codispoti, A. Cohen, and R. C. Dugdale, 1991: On the relationships between
primary production, food web structure, new production and particulate flux.
Oceanography Society, Second Scientific Meeting, Program of Abstracts, 36.
Chavez, F. P., K. R.
Buck, K. H. Coale, J. H. Martin, G. R. DiTullio, N. A. Welschmeyer, A. C.
Jacobson, and R. T. Barber, 1991: Growth rates, grazing, sinking, and iron
limitation of equatorial Pacific phytoplankton. Limnology and Oceanography, 36,
1816-1833.
Chavez, F. P. and R. C.
Brusca, 1991: The Galapagos Islands and their relation to oceanographic
processes in the tropical Pacific. Galapagos marine invertebrates, M. J. James,
Ed., Plenum Press, 9-33.
Chavez, F. P., R. T.
Barber, P. M. Kosro, A. Huyer, S. R. Ramp, T. P. Stanton, and B. R. d.
Mendiola, 1991: Horizontal transport and the distribution of nutrients in the
coastal transition zone off Northern California: Effects on primary production,
phytoplankton biomass and species composition. Journal of Geophysical Research,
96, 14833-14848.
Chavez, F. P., R.
Herlien, G. Thurmond, D. Wright, and J. T. Pennington, 1992: Real-time mooring
systems for interdisciplinary oceanographic research. Autonomous
Chavez, F. P., J. T.
Pennington, R. Herlein, G. Thurmond, C. Sakamoto, and K. R. Buck, 1993: Forcing
and biological impact of the 1992 El Niño in central California. Oceanography
Society, Third Scientific Meeting, Program of Abstracts.
Chavez, F. P., J. T.
Pennington, and K. R. Buck, 1993: Temporal variability of phytoplankton in a
coastal central
Chavez, F., R. Herlien,
G. Thurmond, and D. Wright, 1993: A novel ocean acquisition system for
interdisciplinary science (OASIS). MTS, 78-84 pp.
Chavez, F. P., R. A.
Herlien, and G. D. Thurmond, 1994: OASIS - Acquisition system for
moorings/drifters: Developed for interdisciplinary science, with multiple
adaptable interfaces; tested on ATLAS moorings in
Chavez, F. P. and J. R.
Toggweiler, 1995: Physical estimates of global new production: The upwelling
contribution. Upwelling in the ocean: Modern processes and ancient records, C.
P. Summerhayes, K.-C. Emeis, M. V. Angel, R. L. Smith, and B. Zeitzschel, Eds.,
John Wiley & Sons, 313-320.
Chavez, F. P. and S. L.
Smith, 1995: Biological and chemical consequences of open ocean upwelling.
Upwelling in the ocean: Modern processes and ancient records, C. P.
Summerhayes, K.-C. Emeis, M. V. Angel, R. L. Smith, and B. Zeitzschel, Eds.,
John Wiley & Sons, 149-169.
Chavez, F. P., K. R.
Buck, R. R. Bidigare, D. M. Karl, D. Hebel, M. Latasa, L. Campbell, and J.
Newton, 1995: On the chlorophyll a retention properties of glass-fiber GF/F
filters. Limnology and Oceanography, 40, 428-433.
Chavez, F. P., 1995: A
comparison of ship and satellite chlorophyll from
Chavez, F. P., S. K.
Service, and S. E. Buttrey, 1996: Temperature-nitrate relationships in the central
and eastern tropical Pacific. Journal of Geophysical Research, 101,
20553-20563.
Chavez, F. P., J. T.
Pennington, T. O'Reilly, and G. E. Friederich, 1996: Scales of biological
variability and the fate of primary production in the coast
Chavez, F. P., G. E.
Friederich, R. C. Dugdale, and F. P. Wilkerson, 1996: A study of the role in
the air-sea flux of CO2 during the spring 1995 MBL experiment off
Chavez, F. P. and G. E.
Friederich, 1996: The role of primary production in the carbon cycle of coastal
and open ocean upwelling systems.
Chavez, F. P., K. R.
Buck, S. K. Service, J. Newton, and R. T. Barber, 1996: Phytoplankton
variability in the central and eastern tropical Pacific. Deep-Sea Research II,
43, 835-870.
Chavez, F. P., 1996:
Forcing and biological impact of onset of the 1992 El Niño in central
——, 1996: Iron
fertilization in the equatorial pacific. Nature, 383, 496-501.
Chavez, F. P., J. T.
Pennington, R. A. Herlien, H. W. Jannasch, G. D. Thurmond, and G. E.
Friederich, 1997: Moorings and drifters for real-time interdisciplinary
oceanography. Journal of Atmospheric and Oceanic Technology, 14, 1199-1211.
Chavez, F. P. and C. A.
Collins, 1998:
Chavez, F. P., P. G.
Strutton, and M. J. McPhaden, 1998: Biological-physical coupling in the central
equatorial Pacific during the onset of the 1997-98 El Niño. Geophysical
Research Letters, 25, 3543-3546.
Chavez, F. P., 1998:
California Current System off
Chavez, F. and C.
Collins, 1998: Studies of the
Chavez, F. P., P. G.
Strutton, G. E. Friederich, R. A. Feely, G. C. Feldman, D. G. Foley, and M. J.
McPhaden, 1999: Biological and chemical response of the Equatorial Pacific
Ocean to the 1997-98 El Niño. Science, 286, 2126-2131.
Chavez, F. P., D.
Wright, R. Herlien, M. Kelley, F. Shane, and P. G. Strutton, 2000: A device for
protecting moored spectroradiometers from biofouling. Journal of Oceanographic
and Atmospheric Technology, 17, 215-219.
Chavez, F. P. and C. A.
Collins, 2000: Corrigendum to "Studies of the
——, 2000: Studies of the
——, 2000: Studies of the
Chavez, F. P., J. T.
Pennington, C. G. Castro, J. P. Ryan, R. P. Michisaki, B. Schlining, P. Walz,
K. R. Buck, A. McFadyen, and C. A. Collins, 2002: Biological and chemical
consequences of the 1997-98 El Niño in central California waters. Progress in
Oceanography, 54, 205-232.
Chavez, F. P., C. A.
Collins, A. Huyer, and D. L. Mackas, 2002: El Niño along the west coast of
Chavez, F. P., J. Ryan,
S. E. Lluch-Cota, and M. Niquen, 2003: Sardine fishing in the early 20th
century - Response. Science, 300, 2033-2033.
——, 2003: From anchovies
to sardines and back: Multidecadal change in the
Chavez, F. P., 2003: A
constant sea of change: The biological response to variability. Eos Trans.
AGU,, 84.
——, 2003: A constant sea
of change: The biological response to variability. EOS Transactions,
Chavez, F. P., J. T.
Pennington, R. Michisaki, and J. P. Ryan, 2004: The Monterey Bay Ocean
Time-Series and Observatory (MOTO) sheds light on multi-decadal basin-scale
fluctuations of anchovies and sardines.
Chavez, F. P., J. T.
Pennington, R. Michisaki, and J. Ryan, 2004: The Monterey Bay Ocean Time-series
and Observatory (MOTO) sheds light on multi-decadal basin-scale fluctuations of
anchovies and sardines. Ecosystem Observations, 20-21.
Chavez, F., 2004: A
Chavez, F. P., 2005:
Chapter 16 Biological consequences of interannual to multidecadal variability.
The Sea, A. Robinson and K. Brink, Eds.,
Chavez, F. P., T.
Takahashi, W.-J. Cai, G. Friederich, B. Hales, R. Wanninkhof, and R. A. Feely,
2007: Coastal Oceans. The First State of the Carbon Cycle Report (SOCCR): The
North American Carbon Budget and Implications for the Global Carbon Cycle, A.
W. King, L. Dilling, G. P. Zimmerman, D. M. Fairman, R. A. Houghton, G.
Marland, A. Z. Rose, and T. J. Wilbanks, Eds., A Report by the U.S. Climate
Change Science Program and the Subcommittee on Global Change Research[National
Oceanic and Atmospheric Administration,], 157-166.
Chavez, F. P., 2007:
Variability, Multidecadal. Encyclopedia of Tidepools & Rocky Shores., M. W.
Denny, Gaines, S. D., Ed.,
Chavez, F. P., A.
Bertrand, R. Guevara, P. Soler, J. Csirke 2008: The northern Humboldt Current
System: brief history, present status and a view towards the future. . Progress
in Oceanography, 79, 95-105.
Chavez, F. P., C.
Mauriaca, and C. A. Jerez, 2009: Constitutive and regulated expression vectors
to construct polyphosphate deficient bacteria. BMC Research Notes, 2.
Chavez, F. P. and M.
Messié, 2009: A comparison of Eastern Boundary Upwelling Ecosystems. Progress
in Oceanography, 83, 80-96.
Chavez, F. P., M.
Messié, and J. T. Pennington, 2011: Marine primary production in relation to
climate variability and change. Annual Review of Marine Science, 227-260.
Coale, K. H., K. S.
Johnson, S. E. Fitzwater, R. M. Gordon, S. Tanner, F. P. Chavez, L. Ferioli, C.
M. Sakamoto, P. Rogers, F. Millero, P. Steinberg, P. Nightingale, D. Cooper, W.
P. Cochlan, M. R. Landry, J. Constantinou, G. Rollwagen, A. Trasvina, and R. M.
Kudela, 1996: A massive phytoplankton bloom induced by an ecosystem-scale iron
fertilization experiment in the equatorial Pacific Ocean. Nature, 383, 495-501.
Coale, K. H., K. S.
Johnson, F. P. Chavez, K. O. Buesseler, R. T. Barber, M. A. Brzezinski, W. P.
Cochlan, F. J. Millero, P. G. Falkowski, J. E. Bauer, R. H. Wanninkhof, R. M.
Kudela, M. A. Altabet, B. E. Hales, T. Takahashi, M. R. Landry, R. R. Bidigare,
X. J. Wang, Z. Chase, P. G. Strutton, G. E. Friederich, M. Y. Gorbunov, V. P.
Lance, A. K. Hilting, M. R. Hiscock, M. Demarest, W. T. Hiscock, K. F.
Sullivan, S. J. Tanner, R. M. Gordon, C. N. Hunter, V. A. Elrod, S. E.
Fitzwater, J. L. Jones, S. Tozzi, M. Koblizek, A. E. Roberts, J. Herndon, J.
Brewster, N. Ladizinsky, G. Smith, D. Cooper, D. Timothy, S. L. Brown, K. E.
Selph, C. C. Sheridan, B. S. Twining, and Z. I. Johnson, 2004: Southern ocean
iron enrichment experiment: Carbon cycling in high- and low-Si waters. Science,
304, 408-414.
Collins, C. A., S.
Bollens, F P Chavez, D Krynen, J Paduan, T A Rago C Szczechowski, 1998: Results
of 1997 Hydrographic Measurements off
Collins, C. A., C. G.
Castro, H. Asanuma, T. A. Rago, S. K. Han, R. Durazo, and F. P. Chavez, 2002:
Changes in the hydrography of
Collins, C. A., J. T.
Pennington, C. G. Castro, T. A. Rago, and F. P. Chavez, 2003: The California
Current system off
Conaway, C. H., F. J.
Black, M. Gault-Ringold, J. T. Pennington, F. P. Chavez, and A. R. Flegal,
2009: Dimethylmercury in coastal upwelling waters,
Cosca, C. E., R. A. Feely,
J. Boutin, J. Etcheto, M. J. McPhaden, F. P. Chavez, and P. G. Strutton, 2003:
Seasonal and interannual CO2 fluxes for the central and eastern equatorial
Pacific Ocean as determined from fCO(2)-SST relationships. Journal of
Geophysical Research-Oceans, 108, 10.
Croll, D. A., B.
Marinovic, S. Benson, F. P. Chavez, N. Black, R. Ternullo, and B. R. Tershy,
2005: From wind to whales: trophic links in a coastal upwelling system. Marine
Ecology-Progress Series, 289, 117-130.
Cross, P. S., 1993: A
comparison of Modeled and observed ocean mixed layer behavior in a sea breez
influenced coastal region., Oceanography,
Cross, P. S., L. K.
Rosenfeld, and C. H. Wash, 1994: A comparison of modeled and observed ocean
mixed layer behavior in a sea breeze influenced coastal region. EOS
Transactions, American Geophysical
Cuvelier, M. L., A. E.
Allen, A. Monier, J. P. McCrow, M. Messié, S. G. Tringe, T. Woyke, R. M.
Welsh, T. Ishoey, J. H. Lee, B. J. Binder, C. L. DuPont, M. Latasa, C. Guigand,
K. R. Buck, J. Hilton, M. Thiagarajan, E. Caler, B. Read, R. S. Lasken, F. P.
Chavez, and A. Z. Worden, 2010: Targeted metagenomics and ecology of globally
important uncultured eukaryotic phytoplankton. Proceedings of the
Das, J., T. Maughan, M.
McCann, M. Godin, T. O’Reilly, M. Messié, F. Bahr, K. Gomes, F. Py, J.
Bellingham, G. S. Sukhatme, and K. Rajan, 2011: Towards mixed-initiative,
multi-robot field experiments: design, deployment, and lessons learned.
International Conference on Intelligent Robots and Systems (IROS),
Das, J., F. Py, T.
Maughan, T. O'Reilly, M. Messié, J. Ryan, G. S. Sukhatme, and K. Rajan, 2012:
Coordinated sampling of dynamic oceanographic features with underwater vehicles
and drifters. International Journal of Robotics Research, 31, 626-646.
De
La Cruz-Orozco, M. E., G. Gaxiola-Castro, J. Garcia-Cordova, G. Friederich, F.
Chavez, J.Gomez-Valdes 2007: Presion parcial del bioxido de carbono (pCO2)
frente a Baja California. Carbono en ecosistemas acuaticos de Mexico Instituto
National Ecological, Mexico, DF.
DeLong, E. F., 2001: On
the psychological instability of time series proponents. Acta Retracta, 345.
Dugdale, R. C., F. P.
Wilkerson, R. T. Barber, and F. P. Chavez, 1992: Estimating new production in
the equatorial
Dugdale, R., F.
Wilkerson, D. Halpern, F. Chavez, and R. Barber, 1994: Remote sensing of
seasonal and annual variation of equatorial new production: A model for global
estimates. Advances in Space Research, 14, 169-178.
Dugdale, R. C., G. E.
Friederich, F. P. Chavez, J. T. Pennington, F. P. Wilkerson, and T. P. Hayden,
1996: Spatial distribution of new production on
——, 1996: Air-sea fluxes
of CO2 in coastal upwelling: An overview of the Monterey Bay CoOP experiment.
EOS Transactions, American Geophysical
Elrod, V. A., K. S.
Johnson, F. P. Chavez, S. E. Fitzwater, T. Pennington, K. R. Buck, and P. M.
Walz, 2002: Iron in the
Eppley, R. W., F. P.
Chavez, and R. T. Barber, 1992: Standing stocks of particulate carbon and
nitrogen in the equatorial Pacific at 150øW. Journal of Geophysical Research,
97, 655-661.
Evans, W., P. G.
Strutton, and F. P. Chavez, 2009: Impact of tropical instability waves on
nutrient and chlorophyll distributions in the equatorial Pacific. Deep-Sea
Research Part I: Oceanographic Research Papers, 56, 178-188.
Feely, R. A., R.
Wanninkhof, C. E. Cosca, M. J. McPhaden, R. H. Byrne, F. J. Millero, F. P.
Chavez, T. Clayton, D. M. Campbell, and P. P. Murphy, 1994: The effect of
tropical instability waves on CO 2
species distributions along the equator in the eastern equatorial
Pacific during the 1992 ENSO event. Geophysical Research Letters, 21, 277-280.
Fiedler, P. C., V.
Philbrick, and F. P. Chavez, 1991: Oceanic upwelling and productivity in the
eastern tropical Pacific. Limnology and Oceanography, 36, 1834-1850.
Fiedler, P. C., F. P.
Chavez, D. W. Behringer, and S. B. Reilly, 1992: Physical and biological effect
of Los Ni¤os in the eastern tropical Pacific, 1986-1989. Deep-Sea Research, 39,
199-219.
Field, D., D. Cayan, and
F. Chavez, 2006: Secular warming in the
Field, D. B., T.R.
Baumgartner, V. Ferreira, D. Gutierrez, H. Lozano-Montes, R. Salvatteci, and A. Soutar, 2008: Variability in small
pelagic fishes from scales in marine sediments and other historical records.
Climate Change and Small Pelagic Fish, D. M. Checkley, C. Roy, J. Alheit, Y.
Oozeki, Ed., Cambridge University Press, Chapter 4.
Field, D. B., C. Lange,
D. Cayan, F. Chavez, M. Dalton, P. Smith, 2008: Sardines and anchovies: Natural
variations and fisheries in complex ocean environments. Using the Past to
Inform the Future: The Known, Unknown, and Unknowable (KUU) Conference 2003, E.
S. J.B.J. Jackson, Ed.,
Finney, B., J. Alheit,
K.-C. Emeis, D.B. Field, D. Gutierrez, and U. Struck, 2008:
Paleoecological Studies on Variability
in Marine Fish Populations: A Long-Term Perspective on the Impacts of Climatic
Change on Marine Fisheries. Progress in Oceanography.
Fischer, A., Ryan, J.,
Rienecker, E., 2007: Tidally-forced exchange between Elkhorn Slough and
Fitzwater, S. E., K. S.
Johnson, V. A. Elrod, J. P. Ryan, L. J. Coletti, S. J. Tanner, R. M. Gordon,
and F. P. Chavez, 2003: Iron, nutrient and phytoplankton biomass relationships
in upwelled waters of the California coastal system. Continental Shelf
Research, 23, 1523-1544.
Foster, M. D., 1993:
Evolution of diurnal surface winds and surface currents for
Foster, M. D., C. Wash,
J. D. Paduan, and L. K. Rosenfeld, 1994: Evolution of diurnal surface winds and
CODAR-derived surface currents for
Freon, P. C. W., Chavez,
F. P., 2009: Conjectures on the influence of climate change on ocean ecosystems
dominated by small pelagic fish. Predicted effects of climate change on SPACC
systems, C. R. D. Checkley, J. Alheit Ed., Cambridge University Press, 312-343.
Friederich, G. E., P. G.
Brewer, and R. A. Herlein, 1993: Measurement of carbon dioxide partial pressure
(pCO2) at the sea surface on a moored buoy. Oceanographic Society, Third
Scientific Meeting, Program of Abstracts, 203.
Friederich, G. E., C. M.
Sakamoto, J. T. Pennington, and F. P. Chavez, 1994: On the direction of the
air-sea flux of CO 2 in coastal
upwelling systems.
Friederich, G. E., C. M.
Sakamoto, J. T. P. , and F. P. Chavez, 1994: Global fluxes fo carbon and its
related substances in the coastal sea-ocean-atmosphere system.
Friederich, G. E., 1994:
Sea surface pCO2 measurements in a coastal upwelling system. EOS Transactions,
American Geophysical
Friederich, G. E., P. G.
Brewer, R. A. Herlien, and F. P. Chavez, 1995: Measurement of sea surface
partial pressure of CO 2 from a moored
buoy. Deep-Sea Research I, 42, 1175-1186.
Friederich, G. E., F. P.
Chavez, and R. C. Dugdale, 1996: Inorganic carbon and nutrient utilization in
the central
Friederich, G. E., F P Chavez,
P G. Strutton and P M. Walz, 1998: Bio-optical and Carbon Dioxide Time Series
from Moorings in the Equatorial Pacific during 1997-1998. EOS Transactions,
American Geophysical
Friederich, G. E., P. M.
Walz, M. G. Burczynski, and F. P. Chavez, 2002: Inorganic carbon in the central
Friederich, G. E., J.
Ledesma, O. Ulloa, F.P. Chavez 2008: Air-Sea carbon dioxide fluxes in the
coastal southeastern tropical Pacific. Progress in Oceanography, 79, 156-166.
Frolov, S., J. P. Ryan,
and F. P. Chavez, 2012: Predicting euphotic-depth-integrated chlorophyll-a from
discrete-depth and satellite-observable chlorophyll-a off central
Goericke, R., E.
Venrick, A. Mantyla, S. J. Bograd, F. B. Schwing, A. Huyer, R. L. Smith, P. A.
Wheeler, R. Hooff, W. T. Peterson, F. Chavez, C. Collins, B. Marinovic, N. Lo,
G. Gaxiola-Castro, R. Durazo, K. D. Hyrenbach, and W. J. Sydeman, 2005: The
state of the California current, 2004-2005: Still cool?
Gomez, F., A.
Montecinos, S. Hormazabal, L. A. Cubillos, M. Correa-Ramirez, and F. P. Chavez,
2012: Impact of spring upwelling variability off southern-central
Gray, S. E. C., M. D.
DeGrandpre, T. S. Moore, T. R. Martz, G. E. Friederich, and K. S. Johnson,
2011: Applications of in situ pH measurements for inorganic carbon
calculations. Marine Chemistry, 125, 82-90.
Graybeal, J., J. G.
Bellingham, and F. P. Chavez, 2005: Data systems for ocean observation
programs. Sea Technology, 46, 23-+.
Gutiérrez, D., A.
Sifeddine, D. B. Field, L. Ortlieb, G. Vargas, F. Chávez, F.P. Velazco, V.
Ferreira, P. Tapia, R. Salvatteci, H. Boucher, M. C. Morales, J. Valdés, J.-L.
Reyss, A. Campusano, M. Boussafir, M. Mandeng-Yogo, M. García, T. Baumgartner
2009: Rapid reorganization in ocean biogeochemistry off
Hales, B., P. G.
Strutton, M. Saraceno, R. Letelier, T. Takahashi, R. Feely, C. Sabine, and F.
Chavez, 2012: Satellite-based prediction of pCO2 in coastal waters of the
eastern North Pacific. Progress in Oceanography.
Haley Jr. P.J., P.F.J.
Lermusiaux, A.R. Robinson, W.G. Leslie, O. Logoutov, G. Cossarini, X.S. Liang,
P. Moreno, S.R. Ramp, J.D. Doyle, J. Bellingham, F. Chavez, and
Hendricks, M. B., M. L.
Bender, B. A. Barnett, P. Strutton, and F. P. Chavez, 2005: Triple oxygen
isotope composition of dissolved O-2 in the equatorial Pacific: A tracer of
mixing, production, and respiration. Journal of Geophysical Research-Oceans,
110, 17.
Herlien, R. A., J. T.
Pennington, G. Thurmond, and F. P. Chavez, 1993: An Ocean Acquisition System
for Interdisciplinary Science (OASIS). EOS Transactions, American Geophysical
Hicks, M. R., 1992:
Alongshore sub-thermocline current variability in the central California
Current System, Oceanography,
Hiromi, A., F. Chavez,
C. Collins, R. Michisaki, and T. Rago, 1998: Hydrography of the California
Current System off
Hopcroft, R. R., J. C.
Roff, and F. P. Chavez, 2001: Size paradigms in copepod communities: a
re-examination. Hydrobiologia, 453, 133-141.
Hopcroft, R. R., C.
Clarke, and F. P. Chavez, 2002: Copepod communities in
Huyer, A., P. M. Kosro,
J. Fleischbein, S. R. Ramp, T. Stanton, L. Washburn, F. P. Chavez, T. J.
Cowles, S. D. Pierce, and R. L. Smith, 1991: Currents and water masses of the
coastal transition zone off
Jahnke, R., L. Atkinson,
J. Barth, F. P. Chavez, K. Daly, J. Edson, P. Franks, J. O'Donnell, and O.
Schofield, 2002: Coastal ocean processes and observatories: Advancing coastal
research., Skidaway Institute of Oceanography, 51.
Jannasch, H. W., K. S.
Johnson, and C. M. Sakamoto, 1992: Long-term in situ nitrate analyzers using
osmotic pumps. Autonomous Bio=optical ocean observing systems.
Jannasch, H. W. and K.
S. Johnson, 1993: Long-term in situ osmotically pumped nitrate analyzers.
Oceanographic Society, Third Scientific Meeting, Program of Abstracts, 97.
Jannasch, H. W., G. E.
Friederich, C. M. Sakamoto, and K. S. Johnson, 1993: The MBARI chemical
instrumentation program. MarChem 1993 Workshop on Marine Chemistry.
Jannasch, H. W., K. S.
Johnson, and C. M. Sakamoto, 1994: Continuous nitrate measurments obtained by
osmotically pumped in situ long-term analyzers. EOS Transactions, American
Geophysical
——, 1994: Submersible,
ostmotically pumped analyzers for continuous determination of nitrate in situ.
Analytical Chemistry, 66, 3352-3361.
Johnson, K. S. and H. W.
Jannasch, 1994: Analytical chemistry under the sea surface: monitoring ocean
chemistry in situ Naval Research
Reviews, XLVI, 4-12.
Johnson, K. S., F. P.
Chavez, and G. E. Friederich, 1999: Continental-shelf sediment as a primary
source of iron for coastal phytoplankton. Nature, 398, 697-700.
Johnson, K. S., C. K.
Paull, J. P. Barry, and F. P. Chavez, 2001: A decadal record of underflows from
a coastal river into the deep sea. Geology, 29, 1,019-1,022.
Johnson, K. S., F. P.
Chavez, V. A. Elrod, S. E. Fitzwater, J. T. Pennington, K. R. Buck, and P. M.
Walz, 2001: The annual cycle of iron and the biological response in central
Johnson, K. S., V. A.
Elrod, S. E. Fitzwater, J. N. Plant, F. P. Chavez, S. J. Tanner, R. M. Gordon,
D. L. Westphal, K. D. Perry, J. F. Wu, and D. M. Karl, 2003: Surface
ocean-lower atmosphere interactions in the Northeast Pacific Ocean Gyre:
Aerosols, iron, and the ecosystem response. Global Biogeochemical Cycles, 17.
Johnson, K. S., L. J.
Coletti, and F. P. Chavez, 2006: Diel nitrate cycles observed with in situ
sensors predict monthly and annual new production. Deep-Sea Research Part
I-Oceanographic Research Papers, 53, 561-573.
Johnston, T. M. S., O.
M. Cheriton, J. T. Pennington, and F. P. Chavez, 2009: Thin phytoplankton layer
formation at eddies, filaments, and fronts in a coastal upwelling zone.
Deep-Sea Research Part II: Topical Studies in Oceanography, 56, 246-259.
Jolliff, J. K., R. W.
Gould Jr., B. Penta, W. J. Teague, S. deRada, F. P. Chavez, and R. A. Arnone,
2012: Water mass bio-optical properties in the
Kindle, J. C., R. M.
Hodur, S. deRada, J. D. Paduan, L. K. Rosenfeld, and F. Q. Chavez, 2002: A
COAMPS (TM) reanalysis for the Eastern Pacific: Properties of the diurnal sea
breeze along the central California coast. Geophysical Research Letters, 29.
Knepp, T. N., J.
Bottenheim, M. Carlsen, D. Carlson, D. Donohoue, G. Friederich, P. A. Matrai,
S. Netcheva, D. K. Perovich, R. Santini, P. B. Shepson, W. Simpson, T.
Valentic, C. Williams, and P. J. Wyss, 2010: Development of an autonomous sea
ice tethered buoy for the study of ocean-atmosphere-sea ice-snow pack
interactions: the O-buoy. Atmospheric Measurement Techniques, 3, 249-261.
Kosro, P. M., A. Huyer,
S. R. Ramp, R. L. Smith, F. P. Chavez, T. J. Cowles, M. R. Abbott, P. T. Strub,
R. T. Barber, P. Jessen, and L. F. Small, 1991: The structure of the transition
zone between coastal waters and the open ocean off
Kudela, R. M. and F. P.
Chavez, 1996: Bio-optical properties in relation to an algal bloom caused by
iron enrichment in the equatorial Pacific. Geophysical Research Letters, 23,
3751-3754.
——, 1997: Estimating new
production from the quantum yield of nitrate uptake. SPIE, 2963, 471-476.
Kudela, R. M., W. P.
Cochlan, and R. C. Dugdale, 1997: Carbon and nitrogen uptake response to light
by phytoplankton during an upwelling event. Journal of Plankton Research, 19,
609-630.
Kudela, R. M. and F. P.
Chavez, 2000: Modeling the impact of the 1992 El Niño on new production in
——, 2002: Multi-platform
remote sensing of new production in central
——, 2004: The impact of
coastal runoff on ocean color during an El Niño year in
Leinweber, A., N.
Gruber, H. Frenzel, G. E. Friederich, and F. P. Chavez, 2009: Diurnal carbon
cycling in the surface ocean and lower atmosphere of Santa Monica Bay,
California. Geophysical Research Letters, 36.
Lenarz, W. H., D. A.
Ventresca, W. M. Graham, F. B. Schwing, and F. P. Chavez, 1995: Explorations of
El Niño and associated biological population dynamics off central
Lester, S. E., K. L.
McLeod, H. Tallis, M. Ruckelshaus, B. S. Halpern, P. S. Levin, F. P. Chavez, C.
Pomeroy, B. J. McCay, C. Costello, S. D. Gaines, A. J. Mace, J. A. Barth, D. L.
Fluharty, and J. K. Parrish, 2010: Science in support of ecosystem-based
management for the US West Coast and beyond. Biological Conservation, 143,
576-587.
Marinovic, B. B., D. A.
Croll, N. Gong, S. R. Benson, and F. P. Chavez, 2002: Effects of the 1997-1999
El Niño and La Nina events on zooplankton abundance and euphausiid community
composition within the
Marinovic, B., D. A.
Croll, N. Gong, S. Benson, and F. P. Chavez, 2002: Effects of the 1997-98 El
Niño on zooplankton within the
Martin, J. H., K. H.
Coale, K. S. Johnson, S. E. Fitzwater, R. M. Gordon, S. J. Tanner, C. N.
Hunter, V. A. Elrod, J. L. Nowicki, T. L. Coley, R. T. Barber, S. Lindley, A.
J. Watson, K. A. Van Scoy, C. S. Law, M. I. Liddicoat, R. Ling, T. Stanton, J.
Stockel, C. Collins, A. Anderson, R. R. Bidigare, M. Ondrusek, M. Latasa, F. J.
Millero, K. Lee, W. Yao, J. Z. Zhang, G. E. Friederich, C. M. Sakamoto, F.
Chavez, K. R. Buck, Z. S. Kolber, R. M. Greene, P. G. Falkowski, S. W.
Chisholm, F. Hoge, R. Swift, J. Yungel, S. Turner, P. Nightingale, A. Hatton,
P. Liss, and N. W. Tindale, 1994: Testing the iron hypothesis in ecosystems of
the equatorial Pacific Ocean. Nature, 371, 123-129.
McLaughlin, K., F. P.
Chavez, J. T. Pennington, and A. Paytan, 2006: A time series investigation of
the oxygen isotopic composition of dissolved inorganic phosphate in
Melton, D. C., 1995:
Remote sensing and validation of surface currents from HF radar, Oceanograpy,
Messie, M. and F.
Chavez, 2011: Global Modes of Sea Surface Temperature Variability in Relation
to Regional Climate Indices. Journal of Climate, 24, 4314-4331.
Messie, M. and F. P.
Chavez, 2012: A global analysis of ENSO synchrony: the oceans biological
response to physical forcing. Journal of Geophysical Research.
Messié, M., R. Calienes,
J. Ledesma, R.T. Barber, J.T. Pennington and F.P. Chavez, 2008: Interannual
variability and long term trends in eastern Pacific upwelling ecosystems. Ocean
Sciences, Presentation, Ed.,
Messié, M., R. Calienes,
J. Ledesma, R.T. Barber, J.T. Pennington, F.P. Chavez, 2008:
Physical/biological variability and interactions at the decadal scale in
eastern Pacific upwelling ecosystems. CLIMECO Workshop, Poster, Ed.,
Messié, M., J. Ledesma,
D. Kolber, F.P. Chavez, 2008: Nitrate supply and potential primary productivity
estimates in four eastern boundary upwelling systems. Eastern boundary upwelling
ecosystems, Presentation, Ed.,
Messié, M., J. Ledesma,
D. D. Kolber, R. P. Michisaki, D. G. Foley, and F. P. Chavez, 2009: Potential
new production estimates in four eastern boundary upwelling ecosystems.
Progress in Oceanography, 83, 151-158.
Miller, A. J., J. C.
McWilliams, N. Schneider, J. S. Allen, J. A. Barth, R. C. Beardsley, F. P.
Chavez, T. K. Chereskin, C. A. Edwards, R. L. Haney, K. A. Kelly, J. C. Kindle,
L. N. Ly, J. R. Moisan, M. A. Noble, P. P. Niiler, L. Y. Oey, F. B. Schwing, R.
K. Shearman, and M. S. Swenson, 1999: Observing and modeling the California
Current System. EOS, 80, 533-539.
Morvillez, T., 1997:
Monitoring Temperature Variability using Acoustic Tomography along the
Ohman, M. D., G.E.
Durbin, J. Runge, B.K. Sullivan, D.B. Field, 2008: Relationship of predation
potential to mortality of Calanus finmarchicus on Georges Bank, northwest
Olivieri, R. A., A.
Cohen, and F. P. Chavez, 1993: An ecosystem model of
Olivieri, R. A., 1996:
Plankton dynamics and the fate of primary production in the coastal upwelling
ecosystem of
Olivieri, R. A. and F.
P. Chavez, 2000: A model of plankton dynamics for the coastal upwelling system
of
Osborn, D. A., M. W.
Silver, C. G. Castro, S. M. Bros, and F. P. Chavez, 2007: The habitat of
mesopelagic scyphomedusae in
Paduan, J. D., E. T.
Petruncio, D. E. Barrick, and B. J. Lipa, 1995: Surface currents within and
offshore of
Paduan, J. D. and L. K.
Rosenfeld, 1996: Remotely sensed surface currents in
Paduan, J. D., M. S.
Cook, and D. M. Fernandez, 1997: Two-dimensional diurnal to monthly period
surface currents in
Paduan, J. D. and M. S.
Cook, 1997: Mapping surface currents in
Paduan, J. D., K. C.
Kim, M. S. Cook, and F. P. Chavez, 2006: Calibration and validation of
direction-finding high-frequency radar ocean surface current observations. IEEE
Journal of Oceanic Engineering, 31, 862-875.
Paerl, R. W., K. S.
Johnson, R. M. Welsh, A. Z. Worden, F. P. Chavez, and J. P. Zehr, 2011:
Differential distributions of Synechococcus subgroups across the California
current system. Frontiers in Microbiology 1-22.
Paerl, R. W., K. A.
Turk, R. A. Beinart, F. P. Chavez, and J. P. Zehr, 2012: Seasonal change in the
abundance of Synechococcus and multiple distinct phylotypes in Monterey Bay
determined by rbcL and narB quantitative PCR. Environmental Microbiology, 14, 580-593.
Paytan, M., M. Kastner,
and F. P. Chavez, 1996: Glacial to interglacial fluctuations in productivity in
the equatorial Pacific as indicated by marine barite. Science, 274, 1355-1357.
Paytan, A., B. J.
Cade-Menun, K. McLaughlin, and K. L. Faul, 2003: Selective phosphorus
regeneration of sinking marine particles: evidence from P-31-NMR. Marine
Chemistry, 82, 55-70.
Pennington, J. T. and F.
P. Chavez, 1993: Pelagic barnacles: distribution of larvae and recruitment to
coastal moorings. EOS Transactions, American Geophysical
Pennington, J. T., R. P.
Michisaki, and F. P. Chavez, 1998: The 1997-98 El Niño, Chlorophyll and Primary
Production: Spatial and Seasonal Effects in
Pennington, J. T., M. N.
Tamburri, and J. P. Barry, 1999: Development, temperature tolerance, and
settlement preference of embryos and larvae of the articulate brachiopod
Laqueus californianus. Biological Bulletin, 196, 245-256.
Pennington, J. T. and F.
P. Chavez, 2000: Seasonal fluctuations of temperature, salinity, nitrate,
chlorophyll and primary production at station H3/M1 over 1989-1996 in
Pennington, J. T., S. A.
Stricker, and C. M. Young, 2002: Phylum Brachiopoda. Atlas of marine
invertebrate larvae., 441-461.
Pennington, J. T., R. P.
Michisaki, R. Marin, and F. P. Chavez, 2002: Across the NE Pacific in Spring,
2001: Physical, Chemical and Biological Measures on a Mid-latitude Section.
2002 Ocean Sciences Meeting, AGU Abstract.
Pennington, J. T., K. L.
Mahoney, V. S. Kuwahara, D. D. Kolber, R. Calienes, and F. P. Chavez, 2006:
Primary production in the eastern tropical Pacific: A review. Progress in
Oceanography, 69, 285-317.
Pennington, J. T.,
Castro, C.G.,
Pennington, J. T., C. A.
Castro, C. A. Collins, W. W. I. Evans, G. E. Friederich, R. P. Michisaki, and
F. P. Chavez, 2010: A carbon budget for the northern and central
Peterson, B., R. Emmett,
R. Goericke, E. Venrick, A. Mantyla, S. J. Bograd, F. B. Schwing, S. Ralston,
K. A. Forney, R. Hewitt, N. Lo, W. Watson, J. Barlow, M. Lowry, B. E.
Lavaniegos, F. Chavez, W. J. Sydeman, D. Hyrenbach, R. W. Bradley, P. Warzybok,
K. Hunter, S. Benson, M. Weise, and J. Harvey, 2006: The state of the
California current, 2005-2006: Warm in the North, cool in the South.
Petruncio, E. T., 1993:
Characterization of tidal currents in Monterey Bay from remote and in situ
measurements, Oceanography, Naval Postgraduate School, 113.
Petruncio, E. T., J. D.
Paduan, and L. K. Rosenfeld, 1994: Characterization of tidal currents in
Petruncio, E. T., 1996:
Observations and modeling of the internal tide in a submarine canyon,
Oceanographic,
Petruncio, E. T., L. K.
Rosenfeld, and J. D. Paduan, 1998: Observations of the internal tide in
Pilskaln, C. H., R. F.
Chavez, R. D. Pillsbury, and R. Still, 1991: Timeseries measurements of primary
production, deep-water carbon fluxes and current flow in
Pilskaln, C. H., F. P.
Chavez, K. M. Murphy, P. J. Whaling, R. Y. Anderson, R. D. Pillsbury, and R.
Still, 1991: Seasonal particulate flux in
Pilskaln, C. H., J. B.
Paduan, F. P. Chavez, J. T. Pennington, and R. Y. Anderson, 1993: Carbon
cycling in the coastal upwelling region of the
Pilskaln, C. H., J. B.
Paduan, F. P. Chavez, R. Y. Anderson, and W. M. Berelson, 1996: Carbon export
and regeneration in the coastal upwelling system of
Polito, P. S., J. P.
Ryan, W. T. Liu, and F. P. Chavez, 2001: Oceanic and atmospheric anomalies of
tropical instability waves. Geophysical Research Letters, 28, 2,233-2,336.
Post, W. M., F. P.
Chavez, P. J. Mulholland, J. Pastor, T.-H. Peng, K. Prentice, and T. Webb III,
1992: Climatic feedbacks in the global carbon cycle. The science of global
change: the impact of humans on the environment, D. A. Dunnette and R. J.
O'Brien, Eds., American Chemical Society, 392-412.
Quinones, R. A., M. H.
Gutierrez, G. Daneri, D. Gutierrez A.,H. E. Gonzalez, F.P. Chavez, 2009: The
Humboldt Current System. Carbon and Nutrient Fluxes in Continental Margins,
K.-K. Liu, Ed., Springer-Verlag, 44-64.
Rago, T., R. P.
Michisaki, B. Marinovic, and K. Whitaker, 2006: Physical, Nutrient and
Biological Measurements of Coastal Waters off
Rago, T., R. P.
Michisaki, B. Marinovic, M. Blum, and K. Whitaker, 2007: Physical, Nutrient,
and Biological Measurements of Coastal Water off
——, 2007: Physical,
Nutrient, and Biological Measurements of Coastal Water off
Ramp, S. R., L. K.
Rosenfeld, T. D. Tisch, and M. R. Hicks, 1997: Moored observations of the
current and temperature structure over the continental slope off central
Ramp, S. R., J. D.
Paduan, I. Shulman, J. Kindle, F. L. Bahr, and F. Chavez, 2005: Observations of
upwelling and relaxation events in the northern
Ramp, S. R., R. E.
Davis, N. E. Leonard, I. Shulman, Y. Chao, A. R. Robinson, J. Marsden, P. F. J.
Lermusiaux, D. M. Fratantoni, J. D. Paduan, F. P. Chavez, F. L. Bahr, S. Liang,
W. Leslie, and Z. Li, 2009: Preparing to predict: The Second Autonomous Ocean
Sampling Network (AOSN-II) experiment in the Monterey Bay. Deep-Sea Research
Part II: Topical Studies in Oceanography, 56, 68-86.
Raskoff, K. A., 2001:
The ecology of the mesopelagic hydromedusae in Monterey Bay, California. Ph.D.
Dissertation, University of California at Los Angeles.
Rau, G. H., C. Low, J.
T. Pennington, K. R. Buck, and F. P. Chavez, 1998: Suspended particulate
nitrogen delta N-15 versus nitrate utilization: observations in Monterey Bay,
CA. Deep-Sea Research Part Ii-Topical Studies in Oceanography, 45, 1603-1616.
Rau, G. H., S. Ralston,
J. R. Southon, and F. P. Chavez, 2001: Upwelling and the condition and diet of
juvenile rockfish: A study using C-14, C-13, and N-15 natural abundances.
Limnology and Oceanography, 46, 1565-1570.
Rau, G. H., F. P.
Chavez, and G. E. Friederich, 2001: Plankton C-13/C-12 variations in Monterey
Bay, California: evidence of non-diffusive inorganic carbon uptake by
phytoplankton in an upwelling environment. Deep-Sea Research Part
I-Oceanographic Research Papers, 48, 79-94.
Rienecker, E., 2008:
Intermediate Nepheloid Layers in the Central California Coastal Zone. Eastern
boundary upwelling ecosystems, Presentation, Ed., Las Palmas, Spain.
Rienecker, E., J. Ryan,
M. Blum, C. Dietz, L. Coletti, R. Marin III, W. P. Bissett 2008: Mapping
phytoplankton in situ using a laser scattering sensor. Limnology and
Oceanography, Methods, 6, 153-161.
Robison, B. H., 1993:
New technologies for sanctuary research. Oceanus, 36, 75-80.
Robison, B. H., K. R.
Reisenbichler, R. E. Sherlock, J. M. B. Silguero, and F. P. Chavez, 1998:
Seasonal abundance of the siphonophore,
Nanomia bijuga , in Monterey Bay. Deep-Sea Research II, 45, 1741-1751.
Rogers, P., F. P.
Chavez, H. W. Jannasch, L. J. Ferioli, and C. M. Sakamoto, 1996: Drifting
during IronEXII. EOS Transactions, American Geophysical Union, 1996 Ocean
Sciences Meeting.
Rosenfeld, L., K.,, G.
Hatcher, T. Anderson, J. Roughgarden, and Y. Shkedy, 1993: Upwelling fronts and
barnacle recruitment off central California. Eastern Pacific Ocean Conference,
1993.
Rosenfeld, L. K. and M.
B. A. R. Institute., 1994: Hydrographic data collected in Monterey Bay during 1
September 1988 to 16 December 1992. Monterey Bay Aquarium Research Institute,
549 pp.
Ryan, J. P., P. S.
Polito, P. G. Strutton, and F. P. Chavez, 2002: Unusual large-scale
phytoplankton blooms in the equatorial Pacific. Progress in Oceanography, 55,
263-285.
Ryan, J. P., F. P.
Chavez, J. G. Bellingham, E. Rienecker, R. Kudela, A. V. Woude, R. Maffione,
and A. Fischer, 2002: Environmental processes in the Monterey Bay National
Marine Sanctuary: Studies integrating AVIRIS and synoptic in situ
sensing. Pasadena, CA, 307-318.
Ryan, J. P., H. M.
Dierssen, R. M. Kudela, C. A. Scholin, K. S. Johnson, J. M. Sullivan, A. M.
Fischer, E. V. Rienecker, P. R. McEnaney, and F. P. Chavez, 2005: Coastal ocean
physics and red tides: an example from Monterey Bay, California. Oceanography,
18, 246-255.
Ryan, J. P., F. P.
Chavez, and J. G. Bellingham, 2005: Physical-biological coupling in Monterey
Bay, California: topographic influences on phytoplankton ecology. Marine
Ecology-Progress Series, 287, 23-32.
Ryan, J. P., I. Ueki, Y.
Chao, H. C. Zhang, P. S. Polito, and F. P. Chavez, 2006: Western Pacific
modulation of large phytoplankton blooms in the central and eastern equatorial
Pacific. Journal of Geophysical Research-Biogeosciences, 111, 14.
Ryan, J. P., M. A.
McManus, J. D. Paduan, and F. P. Chavez, 2008: Phytoplankton thin layers caused
by shear in frontal zones of a coastal upwelling system. Marine
Ecology-Progress Series, 354, 21-34.
Ryan, J. P., J. F. R.
Gower, S. A. King, W. P. Bissett, A. M. Fischer, R. M. Kudela, Z. Kolber, F.
Mazzillo, E. V. Rienecker, F. P. Chavez 2008: A coastal ocean extreme bloom
incubator. Geophysical Research Letters, 35, L12602.
Ryan, J. P., A. M.
Fischer, R. M. Kudela, J. F. R. Gower, S. A. King, R. Marin Iii, and F. P.
Chavez, 2009: Influences of upwelling and downwelling winds on red tide bloom
dynamics in Monterey Bay, California. Continental Shelf Research, 29, 785-795.
Saba, V. S., J. R.
Spotila, F. P. Chavez, and J. A. Musick, 2008: Bottom-up and climatic forcing
on the worldwide population of leatherback turtles. Ecology, 89, 1414-1427.
Sakamoto, C. M., G. E.
Friederich, S. K. Service, and F. P. Chavez, 1996: Development of automated
surface seawater nitrate mapping systems for use in open ocean and coastal
waters. Deep-Sea Research I, 43, 1763-1775.
Sakamoto, C. M., F. J.
Millero, W. Yao, G. E. Friederich, and F. P. Chavez, 1998: Surface seawater
distributions of inorganic carbon and nutrients around the Galapagos Islands:
Results from the PlumEx experiment using automated chemical mapping. Deep-Sea
Research II, 45, 1055-1071.
Scholin, C. A., P. E.
Miller, K. R. Buck, F. P. Chavez, P. Harris, P. Haydock, J. Howard, and G.
Cangelosi, 1997: Detection and quantification of Pseudo-nitzschia australis in
cultured and natural populations using LSU rRNA-targeted probes. Limnology and
Oceanography.
Schwarz, J. N., P.
Kowalczuk, S. Kaczmarek, G. F. Cota, B. G. Mitchell, M. Kahru, F. P. Chavez, A.
Cunningham, D. McKee, P. Gege, T. Kishino, D. A. Phinney, and R. Raine, 2002:
Two models for absorption by coloured dissolved organic matter (CDOM).
Oceanologia, 44, 209-241.
Schwing, F. B., T. L.
Hayward, K. M. Sakuma, T. Murphree, A. S. Mascarenas, S. I. L. Castillo, A. W.
Mantyla, S. L. Cummings, F. P. Chavez, K. Baltz, and D. G. Ainley, 1997: The
state of the California Current, 1996-1997: Mixed signals from the tropics.
California Cooperative Oceanic Fisheries Investigations Reports, 38, 22-47.
Service, S. K., J. A.
Rice, and F. P. Chavez, 1998: Relationship between physical and biological
variables during the upwelling period in Monterey Bay, CA. Deep-Sea Research
II, 45, 1669-1685.
Shadden, S. C., F.
Lekien, J. D. Paduan, F. P. Chavez, and J. E. Marsden, 2009: The correlation
between surface drifters and coherent structures based on high-frequency radar
data in Monterey Bay. Deep-Sea Research Part II: Topical Studies in
Oceanography, 56, 161-172.
Shulman, I., J. Kindle,
P. Martin, S. Derada, J. Doyle, B. Penta, S. Anderson, F. Chavez, J. Paduan,
and S. Ramp, 2007: Modeling of upwelling/relaxation events with the Navy
Coastal Ocean Model. Journal of Geophysical Research-Oceans, 112.
Shulman, I., C. Rowley,
S. Anderson, S. DeRada, J. Kindle, P. Martin, J. Doyle, J. Cummings, S. Ramp,
F. Chavez, D. Fratantoni, R. Davis 2009: Impact of glider data assimilation on
the Monterey Bay model. Deep-Sea Research II.
Sifeddine, A., D.
Gutierrez, L. Ortlieb, H. Boucher, F. Velazco, D.B. Field, G. Vargas, M. Boussafir, R. Salvatteci,
V. Ferreira, M. García, J. Valdes, S. Caquineau, M. Mandeng Yogo, F. Cetin, J. Solis, P. Soler, T. Baumgartner, 2008:
Changes in terrestrial runoff, water mass oxygenation and upwelling
productivity recorded in laminated sediments off the Central Peruvian Coast
spanning the last centuries. Progress in Oceanography.
Silguero, J. M. B.,
2001: The seasonal abundance and vertical distribution of rocketship
siphonophores over a seven year period, including the impact of the 1997-1999
ENSO, and their metabolic demand and prey requirements., University of
California at Santa Barbara.
Silver, M. W., S. L.
Coale, C. H. Pilskaln, and F. P. Chavez, 1998: Exploratory observations of
marine aggregates at sub-euphotic depths. Deep-Sea Research Part II-Topical
Studies in Oceanography, 45, 1839-1861.
Silver, M. W., S. L.
Coale, and F. P. Chavez, 1998: Exploratory observations of marine aggregates
> 0.25 mm at sub-euphotic depths (40-400m): Implications for midwater
formation. Deep-Sea Research II, 45, 1669-1685.
Smith, M. A., 1997:
Comparison of trajectories generated by the NOAA oil spill model to
trajectories produced using HF radar-derived surface currents in Monterey Bay.,
Naval Postgraduate School.
Strutton, P. G., J. P.
Ryan, and F. P. Chavez, 2001: Enhanced chlorophyll associated with tropical
instability waves in the equatorial Pacific. Geophysical Research Letters, 28,
2005-2008.
Strutton, P. G. and F.
P. Chavez, 2003: Scales of Biological-Physical Coupling in the Equatorial
Pacific. Handbook of Scaling Methods in Aquatic Ecology: Measurement, Analysis
and Simulation., CRC Press, LLC.
Strutton, P. G., F. P.
Chavez, R. C. Dugdale, and V. Hogue, 2004: Primary productivity in the central
equatorial Pacific (3 degrees S 130 degrees W) during GasEx-2001. Journal of
Geophysical Research-Oceans, 109, 13.
Strutton, P. G. and F.
P. Chavez, 2004: Biological heating in the equatorial Pacific: Observed
variability and potential for real-time calculation. Journal of Climate, 17,
1097-1109.
Strutton, P. G., W.
Evans, and F. P. Chavez, 2008: Equatorial Pacific chemical and biological
variability, 1997-2003. Global Biogeochemical Cycles, 22.
Suzuki, M. T., L. T.
Taylor, and E. F. DeLong, 2000: Quantitative analysis of small-subunit rRNA
genes in mixed microbial populations via 5 '-nuclease assays. Applied and
Environmental Microbiology, 66, 4605-4614.
Suzuki, M. T., C. M.
Preston, F. P. Chavez, and E. F. DeLong, 2001: Quantitative mapping of
bacterioplankton populations in seawater: field tests across an upwelling plume
in Monterey Bay. Aquatic Microbial Ecology, 24, 117-127.
Suzuki, M. T., O. Beja,
L. T. Taylor, and E. F. DeLong, 2001: Phylogenetic analysis of ribosomal RNA
operons from uncultivated coastal marine bacterioplankton. Environmental
Microbiology, 3, 323-331.
Takahashi, T. S. C. S.,
R. Wanninkhof, C. Sweeney, R. A. Feely, D. W. Chipman, B. Hales, G. Friederich,
F. P. Chavez, C. Sabine, A. Watson, D. C. E. Bakker, U. Schuster, N. Metzl, H.
Yoshikawa-Inoue, Masao Ishii, T. Midorikawa, Y. Nojiri, A. Körtzinger, T.
Steinhoff, M. Hoppema, J. Olafsson, T. S. Arnarson, B. Tilbrook, T. Johannessen,
A. Olsen, R. Bellerby, C. S. Wong, Bruno Delille, N. R. Bates, H. J. W. de Baar
2008: Climatological Mean and Decadal Change in Surface Ocean pCO2, and Net
Sea-air CO2 Flux over the Global Oceans. Deep-Sea Research II.
van den Bosch, J., C. M.
Davis, and W. Rhea, 1993: Atomospheric correction of AVIRIS data of Monterey
Bay contaminated by thin cirrus clouds.
Vesecky, J. F., C. C.
Teague, R. G. Onstott, J. M. Daida, P. Hansen, D. Fernandez, N. Schnepf, and K.
Fischer, 1997: Surface current response to land-sea breeze circulation in
Monterey Bay, California as observed by a new multifrequency HF radar. IEEE
Oceans 97.
Wankel, S. D., C.
Kendall, J. T. Pennington, F. P. Chavez, and A. Paytan, 2007: Nitrification in
the euphotic zone as evidenced by nitrate dual isotopic composition:
Observations from Monterey Bay, California. Global Biogeochemical Cycles, 21,
13.
Wankel, S. D., S. B.
Joye, V. A. Samarkin, S. R. Shah, G. Friederich, J. Melas-Kyriazi, and P. R.
Girguis, 2010: New constraints on methane fluxes and rates of anaerobic methane
oxidation in a Gulf of Mexico brine pool via in situ mass spectrometry.
Deep-Sea Research Part II: Topical Studies in Oceanography, 57, 2022-2029.